Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	914331	914395	65	3 [1]	[1] 2	csd	putative cysteine desulfurase

GGATCATTGGCAACTGATGGTTATGAAAATGCCCGTGAAACCGTTCGTCGTTTTATTAATGCGAAGTATTTTGAAGAAATCATTTTTACACGCGGAACAACTGCGTCGATTAACCTTGTAGCACATAGCTATGGTGATGCAAATGTTGAAGAGGGCGATG  >  USA300TCH1516_ALE/914190‑914349                                                                                                                                             |                    ggATCATTGGCAACTGATGGTTATGAAAATGCCCGTGAAACCGTTCGTCGTTTTATTAATGCGAAGTATTTTGAAGAAATCATTTTTACACGCGGAACAACTGCGTCGATTAACCTTGTAGCACATAGCTATGGTGATGCa                     >  1:28594/1‑141 (MQ=255) ggATCATTGGCAACTGATGGTTATGAAAATGCCCGTGAAACCGTTCGTCGTTTTATTAATGCGAAGTATTTTGAAGAAATCATTTTTACACGCGGAACAACTGCGTCGATTAACCTTGTAGCACATAGCTATGGTGATGCa                     >  1:28600/1‑141 (MQ=255)                    gTTATGAAAATGCCCGTGAAACCGTTCGTCGTTTTATTAATGCGAAGTATTTTGAAGAAATCATTTTTACACGCGGAACAACTGCGTCGATTAACCTTGTAGCACATAGCTATGGTGATGCAAATGTTGAAGAGGGCGATg  <  1:48966/141‑1 (MQ=255)                                                                                                                                             |                    GGATCATTGGCAACTGATGGTTATGAAAATGCCCGTGAAACCGTTCGTCGTTTTATTAATGCGAAGTATTTTGAAGAAATCATTTTTACACGCGGAACAACTGCGTCGATTAACCTTGTAGCACATAGCTATGGTGATGCAAATGTTGAAGAGGGCGATG  >  USA300TCH1516_ALE/914190‑914349

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑