Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	925221	925255	35	2 [1]	[1] 2	USA300HOU_RS04590	hypothetical protein

ATAAACTTCAAGATGTGAAGATTAAGCCAACCATTCAAGATACTGAACATTAATAAAACCCTTAGCTAGATTGAAAATGGGAATCATGCAATTCAAGCATGGACCTGTAATCTAGTTAGGGGTTTTTATCTTTAATGAATGACTTC  >  USA300TCH1516_ALE/925080‑925225                                                                                                                                             |      aTAAACTTCAAGATGTGAAGATTAAGCCAACCATTCAAGATACTGAACATTAATAAAACCCTTAGCTAGATTGAAAATGGGAATCATGCAATTCAAGCATGTACCTGTAATCTAGTTAGGGGTTTTTATCTTTaatgaatg       <  2:54684/141‑1 (MQ=255)      cTTCAAGATGTGAAGATTAAGCCAACCATTCAAGATACTGAACATTAATAAAACCCTTAGCTAGATTGAAAATGGGAATCATGCAATTCAAGCATGGACCTGTAATCTAGTTAGGGGTTTTTATCTTTAATGAATGACTTc  >  2:27483/1‑141 (MQ=255)                                                                                                                                             |      ATAAACTTCAAGATGTGAAGATTAAGCCAACCATTCAAGATACTGAACATTAATAAAACCCTTAGCTAGATTGAAAATGGGAATCATGCAATTCAAGCATGGACCTGTAATCTAGTTAGGGGTTTTTATCTTTAATGAATGACTTC  >  USA300TCH1516_ALE/925080‑925225

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑