Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1249157	1249214	58	2 [1]	[1] 3	smc_2	Chromosome partition protein Smc

AAAACGACTAGAAGATGAAATTGAACGCTACACAAAACTTTCTAAAGAAGGTAAGGAAAGCGTTACTAAAACACAACAAACCTTACATCAGAAACAATCTGATCTTGCTGTGGTTAAAGAGCGTATTAAAACACAACAACAGACA  >  USA300TCH1516_ALE/1249016‑1249160                                                                                                                                             |     aaaaCGACTAGAAGATGAAATTGAACGCTACACAAAACTTTCTAAAGAAGGTAAGGAAAGCGTTACTAAAACACAACAAACCTTACATCAGAAACAATCTGATCTTGCTGTGGTTAAAGAGCGTATTAAAACacaacaaca      >  2:28254/1‑141 (MQ=255)     cGACTAGAAGATGAAATTGAACGCTACACAAAACTTTCTAAAGAAGGTAAGGAAAGCGTTACTAAAACACAACAAACCTTACATCAGAAACAATCTGATCTTGCTGTGGTTAAAGAGCGTATTAAAACACAACAACAGACa  >  2:30490/1‑141 (MQ=255)                                                                                                                                             |     AAAACGACTAGAAGATGAAATTGAACGCTACACAAAACTTTCTAAAGAAGGTAAGGAAAGCGTTACTAAAACACAACAAACCTTACATCAGAAACAATCTGATCTTGCTGTGGTTAAAGAGCGTATTAAAACACAACAACAGACA  >  USA300TCH1516_ALE/1249016‑1249160

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑