Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1259647	1259737	91	2 [1]	[1] 2	rbgA	Ribosome biogenesis GTPase A

CAACAATGGATTAAAGTTGGTAATGCATTACAACTATTAGACACACCAGGGATACTTTGGCCTAAATTTGAAGATGAAGAAGTCGGTAAGAAGTTGAGTTTAACTGGTGCGATAAAAGATAGTATTGTGCACTTAGATGAAGTTGCCATCTATGGATTAAACTTTTTAAT  >  USA300TCH1516_ALE/1259506‑1259675                                                                                                                                             |                              caacaaTGGATTAAAGTTGGTAATGCATTACAACTATTAGACACACCAGGGATACTTTGGCCTAAATTTGAAGATGAAGAAGGCGGTAAGAAGTTGAGTTTAACTGGTGCGATAAAAGATAGTATTGTGCACTTAGATGaa                               <  2:45681/141‑1 (MQ=255)                              aCAACTATTAGACACACCAGGGATACTTTGGCCTAAATTTGAAGATGAAGAAGTCGGTAAGAAGTTGAGTTTAACTGGTGCGATAAAAGATAGTATTGTGCACTTAGATGAAGTTGCCATCTATGGATTAAACTTTTTAAt  <  2:19610/141‑1 (MQ=255)                                                                                                                                             |                              CAACAATGGATTAAAGTTGGTAATGCATTACAACTATTAGACACACCAGGGATACTTTGGCCTAAATTTGAAGATGAAGAAGTCGGTAAGAAGTTGAGTTTAACTGGTGCGATAAAAGATAGTATTGTGCACTTAGATGAAGTTGCCATCTATGGATTAAACTTTTTAAT  >  USA300TCH1516_ALE/1259506‑1259675

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑