Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1607820	1607979	160	3 [1]	[1] 2	[frc]–[USA300HOU_RS07970]	[frc],[USA300HOU_RS07970]

CCCCGATGATTTTAATGGATTATTTGGATTAATTGCCTCATTAGATGTTCCTTGATAAATTATTGTCTGTTGACCAGTTGGTTTACTTTTATCATCTAATAACTCATATATTTTAATATCAGCAGCACCATTCAAATTACTATTCTTATCATCATTATAACTGTCTACTTGTTTAAACCTTTTTCCATTAACTTTAAATTCTTTTTTTATATCAATATTTTGATAAACCCAGTAACTACTTAATTCTGTTAAATC  >  USA300TCH1516_ALE/1607679‑1607933                                                                                                                                             |                                                                                                                   ccccGATGATTTTAATGGATTATTTGGATTAATTGCCTCATTAGATGTTCCTTGATAAATTATTGTCTGTTGACCAGTTGGTTTACTTTTATCATCTAATAACTCATATATTTTAATATCAGCAGCACCATTCAAATTACt                                                                                                                    <  1:21945/141‑1 (MQ=255) ccccGATGATTTTAATGGATTATTTGGATTAATTGCCTCATTAGATGTTCCTTGATAAATTATTGTCTGTTGACCAGTTGGTTTACTTTTATCATCTAATAACTCATATATTTTAATATCAGCAGCACCATTCAAATTACt                                                                                                                    <  1:58978/141‑1 (MQ=255)                                                                                                                   aaTATCAGCAGCACCATTCAAATTACTATTCTTATCATCATTATAACTGTCTACTTGTTTAAACCTTTTTCCATTAACTTTAAATTCTTTTTTTATATCTTTATTTTGATAAACCCAGTAACTACTTAATTCTGTTAAATc  >  2:16117/1‑141 (MQ=255)                                                                                                                                             |                                                                                                                   CCCCGATGATTTTAATGGATTATTTGGATTAATTGCCTCATTAGATGTTCCTTGATAAATTATTGTCTGTTGACCAGTTGGTTTACTTTTATCATCTAATAACTCATATATTTTAATATCAGCAGCACCATTCAAATTACTATTCTTATCATCATTATAACTGTCTACTTGTTTAAACCTTTTTCCATTAACTTTAAATTCTTTTTTTATATCAATATTTTGATAAACCCAGTAACTACTTAATTCTGTTAAATC  >  USA300TCH1516_ALE/1607679‑1607933

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑