Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ USA300TCH1516_ALE 1615837 1615865 29 2 [1] [0] 3 fur/nudF Ferric uptake regulation protein/ADP‑ribose pyrophosphatase

CTTCGCGTTGTGGCGTTAGCTTATATGATGATTGTTGTAATTGTTGCTTAACGCGATTTAATCGTTCTTCCAACGATGTCCACTCCCCTACTAATAATTAAAATCATTACAAATTATTTCAAACTTCACAATTAAAACTAACAGTTTTCTCAATAAAATGCAAGCTT  >  USA300TCH1516_ALE/1615696‑1615862
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cTTCGCGTTGTGGCGTTAGCTTATATGATGATTGTTGTAATTGTTGCTTAACGCGATTTAATCGTTCTTCCAACGATGTCCACTCCCCTACTAATAATTAAAATCATTACAAATTATTTCAAACTTCACAATTAAAACTaa                            >  2:28156/1‑141 (MQ=255)
                          gatgatTGTTGTAATTGTTGCTTAACGCGATTTAATCGTTCTTCCAACGATGTCCACTCCCCTACTAATAATTAAAATCATTACAAATTATTTCAAACTTCACAATTAAAACTAACAGTTTTCTCAATAAAATGCAAGCtt  <  1:15675/141‑1 (MQ=255)
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CTTCGCGTTGTGGCGTTAGCTTATATGATGATTGTTGTAATTGTTGCTTAACGCGATTTAATCGTTCTTCCAACGATGTCCACTCCCCTACTAATAATTAAAATCATTACAAATTATTTCAAACTTCACAATTAAAACTAACAGTTTTCTCAATAAAATGCAAGCTT  >  USA300TCH1516_ALE/1615696‑1615862

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: