Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1671314	1671372	59	2 [0]	[1] 2	trmK	tRNA (adenine(22)‑N(1))‑methyltransferase

GTGCTTCTAACTCTCTTTGCCATTTTTTTATAAAATATTCATTTTTGTTGTTCAGCAATTTTGGTCCGAATTTCAATTCATCAGATGATAGCTCTATTAATTCTGTAGAATATTCTGCTACAACAATTTCATAAATATGGC  >  USA300TCH1516_ALE/1671173‑1671313                                                                                                                                             | gTGCTTCTAACTCTCTTTGCCATTTTTTTATAAAATATTCATTTTTGTTGTTCAGCAATTTTGGTCCGAATTTCAATTCATCAGATGATAGCTCTATTAATTCTGTAGAATATTCTGCTACAACAATTTCATAAATATGGc  <  2:61387/141‑1 (MQ=255) gTGCTTCTAACTCTCTTTGCCATTTTTTTATAAAATATTCATTTTTGTTGTTCAGCAATTTTGGTCCGAATTTCAATTCATCAGATGATAGCTCTATTAATTCTGTAGAATATTCTGCTACAACAATTTCATAAATATGGc  <  2:61396/141‑1 (MQ=255)                                                                                                                                             | GTGCTTCTAACTCTCTTTGCCATTTTTTTATAAAATATTCATTTTTGTTGTTCAGCAATTTTGGTCCGAATTTCAATTCATCAGATGATAGCTCTATTAATTCTGTAGAATATTCTGCTACAACAATTTCATAAATATGGC  >  USA300TCH1516_ALE/1671173‑1671313

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑