Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1710132	1710259	128	2 [1]	[1] 2	fic	Adenosine monophosphate‑protein transferase SoFic

CTAAGTAGTTATCATATTTTTTAATTGTATTATTAATTTTTACTCTTCCTACTCCCAATATGTTTTCTAAATCAATTAATGTTAATCTATTTCTTTTATTTCCAAACAATTTATCCATTGAAAGGAGATACAAAAATTCATAATCTATCTGTT  >  USA300TCH1516_ALE/1709991‑1710143                                                                                                                                             |             cTAAGTAGTTATCATATTTTTTAATTGTATTATTAATTTTTACTCTTCCTACTCCCAATATGTTTTCTAAATCAATTAATGTTAATCTATTTCTTTTATTTCCAAACAATTTATCCATTGAAAGGAGATACAAAAATTCAt              <  2:12121/141‑1 (MQ=255)             cATATTTTTTAATTGTATTATTAATTTTTACTCTTCCTACTCCCAATATGTTTTCTAAATCAATTAATGTTAATCTATTTCTTTTATTTCCAAACAATTTATCCATTGAAAGGAGATACAAAAATTCATAATCTATCTGtt  <  2:48482/141‑1 (MQ=255)                                                                                                                                             |             CTAAGTAGTTATCATATTTTTTAATTGTATTATTAATTTTTACTCTTCCTACTCCCAATATGTTTTCTAAATCAATTAATGTTAATCTATTTCTTTTATTTCCAAACAATTTATCCATTGAAAGGAGATACAAAAATTCATAATCTATCTGTT  >  USA300TCH1516_ALE/1709991‑1710143

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑