Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1730734	1730777	44	2 [0]	[1] 2	iscS_1	Cysteine desulfurase IscS

AAAATATAGATTTACAATATGGCCTGTAGCATCCGTCATTGAACCATTTAATTCAAATGGAATCGCTCTTTCTTGTAATTTAACTAAAAATTGTTCTTTTAAATTCATTAAATGAATATTGTTATCGTCTCGATTCTTTTC  >  USA300TCH1516_ALE/1730593‑1730733                                                                                                                                             | aaaaTATAGATTTACAATATGGCCTGTAGCATCCGTCATTGAACCATTTAATTCAAATGGAATCGCTCTTTCTTGTAATTTAACTAAAAATTGTTCTTTTAAATTCATTAAATGAATATTGTTATCGTCTCGATTCTTTTc  <  1:14222/141‑1 (MQ=255) aaaaTATAGATTTACAATATGGCCTGTAGCATCCGTCATTGAACCATTTAATTCAAATGGAATCGCTCTTTCTTGTAATTTAACTAAAAATTGTTCTTTTAAATTCATTAAATGAATATTGTTATCGTCTCGATTCTTTTc  >  2:20999/1‑141 (MQ=255)                                                                                                                                             | AAAATATAGATTTACAATATGGCCTGTAGCATCCGTCATTGAACCATTTAATTCAAATGGAATCGCTCTTTCTTGTAATTTAACTAAAAATTGTTCTTTTAAATTCATTAAATGAATATTGTTATCGTCTCGATTCTTTTC  >  USA300TCH1516_ALE/1730593‑1730733

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑