Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1772796	1772968	173	2 [1]	[1] 2	[USA300HOU_RS08850]–[hemA]	[USA300HOU_RS08850],[hemA]

AAAACTTTGATAAGGTTAAGAATTAAAGAGATTGAAATAATCAGCCAACTTAAAGTATAGAATACATCTGAAATAGACCCTAATGGAATATGTCTAGTTTGTATAATAAAAATAGATAAAGAGATTGTTTGTAAAACCCAAACAATCCCCAATAAATATATGCCTAAACTTCTAATCTTATGACTTTTTTGTACAAAATCATAAAAATAGCAAATGATACTGATTAAG  >  USA300TCH1516_ALE/1772655‑1772882                                                                                                                                             |                                                                                        aaaaCTTTGATAAGGTTAAGAATTAAAGAGATTGAAATAATCAGCCAACTTAAAGTATAGAATACATCTGAAATAGCCCCTAATGGAATATGTCTAGTTTGTATAATAAAANTAGATAAAGAGANTGTTTGTAAAACCCaa                                                                                         <  1:62825/141‑1 (MQ=255)                                                                                        atatGTCTAGTTTGTATAATAAAAATAGATAAAGAGATTGTTTGTAAAACCCAAACAATCCCCAATAAATATATGCCTAAACTTCTAATCTTATGACTTTTTTGTACAAAATCATAAAAATAGCAAATGATACTGATTAAg  <  2:28767/141‑1 (MQ=255)                                                                                                                                             |                                                                                        AAAACTTTGATAAGGTTAAGAATTAAAGAGATTGAAATAATCAGCCAACTTAAAGTATAGAATACATCTGAAATAGACCCTAATGGAATATGTCTAGTTTGTATAATAAAAATAGATAAAGAGATTGTTTGTAAAACCCAAACAATCCCCAATAAATATATGCCTAAACTTCTAATCTTATGACTTTTTTGTACAAAATCATAAAAATAGCAAATGATACTGATTAAG  >  USA300TCH1516_ALE/1772655‑1772882

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑