Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1774551	1774583	33	2 [1]	[1] 2	engB	putative GTP‑binding protein EngB

TTTGACAAAATGATGAACGTTGAAAAATGTTATCAATTGTGTACTAATTAAAAGTTTCGTGCTTACATTATTTTTAAAATTTTTGTATAAGTTTTGACGTACAAAAACTATGAAATATACGGTTCAATTAAATTCCATATTTGTTG  >  USA300TCH1516_ALE/1774410‑1774555                                                                                                                                             |      tttGACAAAATGATGAACGTTGAAAAATGTTATCAATTGTGTACTAATTAAAAGTTTCGTGCTTACATTATTTTTAAAATTTTTGTATAAGTTTTGACGTACAAAAACTATGAAATATACGGTTCAATTAAATTCCATAtt       >  2:55615/1‑141 (MQ=255)      cAAAATGATGAACGTTGAAAAATGTTATCAATTGTGTACTAATTAAAAGTTTCGTGCTTACATTATTTTTAAAATTTTTGTATAAGTTTTGACGTACAAAAACTATGAAATATACGGTTCAATTAAATTCCATATttgttg  >  1:26557/1‑141 (MQ=255)                                                                                                                                             |      TTTGACAAAATGATGAACGTTGAAAAATGTTATCAATTGTGTACTAATTAAAAGTTTCGTGCTTACATTATTTTTAAAATTTTTGTATAAGTTTTGACGTACAAAAACTATGAAATATACGGTTCAATTAAATTCCATATTTGTTG  >  USA300TCH1516_ALE/1774410‑1774555

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑