Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ USA300TCH1516_ALE 1913310 1913436 127 2 [1] [1] 2 [yvgN] [yvgN]

TCTTCTCTAGCAATACCAGTTGACTCCAATCCGGCACGAATGCCAGCACCTACTTGTTCTTCATTCCCATAAACTTTTGCGGTATCAATACTACGATATCCTTGTTCAATGGCATACTTAACACTTTCCATGCAATTTTCATCATTTTCCACACGAAATGTCCCTAAACCAATTTGTGGCATCG  >  USA300TCH1516_ALE/1913169‑1913352
                                                                                                                                            |                                           
tcttctCTAGCAATACCAGTTGACTCCAATCCGGCACGAATGCCAGCACCTACTTGTTCTTCATTCCCATAAACTTTTGCGGTATCAATACTACGATATCCTTGTTCAATGGCATACTTAACACTTTCCATGCAATTTtca                                             <  1:55866/141‑1 (MQ=255)
                                           cAGCACCTACTTGTTCTTCATTCCCATAAACTTTTGCGGTATCAATACTACGATATCCTTGTTCAATGGCATACTTAACACTTTCCATGCAATTTTCATCATTTTCCACACGAAATGTCCCTAAACCAATTTGTGGCATCg  <  2:31995/141‑1 (MQ=255)
                                                                                                                                            |                                           
TCTTCTCTAGCAATACCAGTTGACTCCAATCCGGCACGAATGCCAGCACCTACTTGTTCTTCATTCCCATAAACTTTTGCGGTATCAATACTACGATATCCTTGTTCAATGGCATACTTAACACTTTCCATGCAATTTTCATCATTTTCCACACGAAATGTCCCTAAACCAATTTGTGGCATCG  >  USA300TCH1516_ALE/1913169‑1913352

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: