Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	2054991	2055083	93	2 [1]	[1] 2	purB/sspP	Adenylosuccinate lyase/Staphopain A

GTTCAATCATTTTTTTAACTCCTATCGTATGTATACTCGAATTTTCAAAAACAGAACATTTTTTAATAAAAATAAACAAAAAGTTCGTTTTTAACTCTACTCTTCACAGTTTAACAGAATTGGTTATAAATGTATAAAAAATTTC  >  USA300TCH1516_ALE/2054850‑2054994                                                                                                                                             |     gTTCAATCATTTTTTTAACTCCTATCGTATGTATACTCGAATTTTCAAAAACAGAACATTTTTTAATAAAAATAAACAAAAAGTTCGTTTTTAACTCTACTCTTCACAGTTTAACAGAATTGGTTATAAATGTATaaaaaa      <  1:54781/141‑1 (MQ=255)     aaTCATTTTTTTAACTCCTATCGTATGTATCCTCGAATTTTCAAAAACAGAACATTTTTTAATAAAAATAAACAAAAAGTTCGTTTTTAACTCTACTCTTCACAGTTTAACAGAATTGGTTATAAATGTATAAAAAATTTc  <  1:28918/141‑1 (MQ=255)                                                                                                                                             |     GTTCAATCATTTTTTTAACTCCTATCGTATGTATACTCGAATTTTCAAAAACAGAACATTTTTTAATAAAAATAAACAAAAAGTTCGTTTTTAACTCTACTCTTCACAGTTTAACAGAATTGGTTATAAATGTATAAAAAATTTC  >  USA300TCH1516_ALE/2054850‑2054994

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑