Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	2176707–2179431	2181125–2179438	8–4419	2 [1]	[1] 2	ilvA/USA300TCH1516_02069	L‑threonine dehydratase biosynthetic IlvA/tRNA‑Gly

ATGAATGTAAATTATACATTCAAAACTAGATAGTAAGTAAAAGTGATTTTGCTTCGCAAAACATTTATTTTGATTAAGTCTTCGATCGATTAGTATTCGTCAGCTCCACATGTCACCATGCTTCCACCTCGAACCTATTAAC  >  USA300TCH1516_ALE/2176566‑2176707                                                                                                                                             |  atGAATGTAAATTATACATTCAAAACTAGATAGTAAGTAAAAGTGATTTTGCTTCGCAAAACATTTATTTTGATTAAGTCTTCGATCGATTAGTATTCGTCAGCTCCACATGTCACCATGCTTCCACCTCGAACCTATTaa   >  1:62027/1‑141 (MQ=32)  tGAATGTAAATTATACATTCAAAACTAGATAGTAAGTAAAAGTGATTTTGCTTCGCAAAACATTTATTTTGATTAAGTCTTCGATCGATTAGTATTCGTCAGCTCCACATGTCACCATGCTTCCACCTCGAACCTATTAAc  <  1:16592/141‑1 (MQ=32)                                                                                                                                             |  ATGAATGTAAATTATACATTCAAAACTAGATAGTAAGTAAAAGTGATTTTGCTTCGCAAAACATTTATTTTGATTAAGTCTTCGATCGATTAGTATTCGTCAGCTCCACATGTCACCATGCTTCCACCTCGAACCTATTAAC  >  USA300TCH1516_ALE/2176566‑2176707

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑