Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | USA300TCH1516_ALE | 2264497 | 2264708 | 212 | 2 [1] | [1] 2 | USA300HOU_RS11590 | hypothetical protein |
CCGATTTATTTATTGCATTTAAAAAAGGTAATTATTTAAAGAGCGTTCTGATCGGTCTTGTATCTATAGCAATGATTATCGTTCTTTCACTTCTGACATCATTACTATACAAATTATTTTCTCCAGTATCAGAAATGATTATGAATTCAGTACAATCATCATATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAGCAATTATTACTTGGTTAT > USA300TCH1516_ALE/2264356‑2264613 | cctatttatttATTGCATTTAAAAAAGGTAATTATTTAAAGAGCGTTCTGATCGGTCTTGTATCTATAGCAATGATTATCGTTCTTTCACTTCTGACATCATTACTATACAAATTATTTTCTCCAGTATCAGAAATGATTa < 1:63/138‑1 (MQ=255) tttCTCCAGTATCAGAAATTATTATGAATTCAGTACAATCATCATATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAGCAATTATTACTTGGTTAt < 1:64359/141‑1 (MQ=255) | CCGATTTATTTATTGCATTTAAAAAAGGTAATTATTTAAAGAGCGTTCTGATCGGTCTTGTATCTATAGCAATGATTATCGTTCTTTCACTTCTGACATCATTACTATACAAATTATTTTCTCCAGTATCAGAAATGATTATGAATTCAGTACAATCATCATATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAGCAATTATTACTTGGTTAT > USA300TCH1516_ALE/2264356‑2264613 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |