Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ USA300TCH1516_ALE 2264497 2264708 212 2 [1] [1] 2 USA300HOU_RS11590 hypothetical protein

CCGATTTATTTATTGCATTTAAAAAAGGTAATTATTTAAAGAGCGTTCTGATCGGTCTTGTATCTATAGCAATGATTATCGTTCTTTCACTTCTGACATCATTACTATACAAATTATTTTCTCCAGTATCAGAAATGATTATGAATTCAGTACAATCATCATATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAGCAATTATTACTTGGTTAT  >  USA300TCH1516_ALE/2264356‑2264613
                                                                                                                                            |                                                                                                                     
cctatttatttATTGCATTTAAAAAAGGTAATTATTTAAAGAGCGTTCTGATCGGTCTTGTATCTATAGCAATGATTATCGTTCTTTCACTTCTGACATCATTACTATACAAATTATTTTCTCCAGTATCAGAAATGATTa                                                                                                                       <  1:63/138‑1 (MQ=255)
                                                                                                                     tttCTCCAGTATCAGAAATTATTATGAATTCAGTACAATCATCATATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAGCAATTATTACTTGGTTAt  <  1:64359/141‑1 (MQ=255)
                                                                                                                                            |                                                                                                                     
CCGATTTATTTATTGCATTTAAAAAAGGTAATTATTTAAAGAGCGTTCTGATCGGTCTTGTATCTATAGCAATGATTATCGTTCTTTCACTTCTGACATCATTACTATACAAATTATTTTCTCCAGTATCAGAAATGATTATGAATTCAGTACAATCATCATATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAGCAATTATTACTTGGTTAT  >  USA300TCH1516_ALE/2264356‑2264613

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: