| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | USA300TCH1516_ALE | 2478750 | 2478968 | 219 | 2 [1] | [1] 3 | USA300HOU_RS12765 | hypothetical protein |
GACAAATTCTCAATTTGTTTTATCCTATGACCTATTTCAAAACCCAACAGATACTAGAACTTTAATTCCATTTTTAACAATGATTCAAAATACCTTCGGTTATTTACCGGAGTATATTGTAGCTGATGCATGTTATGATAGTGAGCAAAACTATATGGCTATTATAGATGATTTTAATAAAACGCCACTTATTACGTATGTCATGTTTATTAAAGATAAAACTAGAAAGTTTAAAAGTGACATTTTTA > USA300TCH1516_ALE/2478609‑2478856 | gACAAATTCTCAATTTGTTTTATCCTATGACCTATTTCAAAACCCAACAGATACTAGAACTTTAATTCCATTTTTAACAATGATTCAAAATACCTTCGGTTATTTACCGGAGTATATTGTAGCTGATGCATGTTATGATAg < 1:18209/141‑1 (MQ=35) cGGAGTATATTGTAGCTGATGCATGTTATGATAGTGAGCAAAACTATATGGCTATTATAGATGATTTTAATAAAACGCCACTTATTACGTATGTCATGTTTATTAAAGATAAAACTAGAAAGTTTAAAAGTGACATTTTTa < 1:44296/141‑1 (MQ=40) | GACAAATTCTCAATTTGTTTTATCCTATGACCTATTTCAAAACCCAACAGATACTAGAACTTTAATTCCATTTTTAACAATGATTCAAAATACCTTCGGTTATTTACCGGAGTATATTGTAGCTGATGCATGTTATGATAGTGAGCAAAACTATATGGCTATTATAGATGATTTTAATAAAACGCCACTTATTACGTATGTCATGTTTATTAAAGATAAAACTAGAAAGTTTAAAAGTGACATTTTTA > USA300TCH1516_ALE/2478609‑2478856 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |