Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	2540122	2540154	33	2 [1]	[1] 2	fieF/sbi	Ferrous‑iron efflux pump FieF/Immunoglobulin‑binding protein sbi

GACGTTTTACGTCCAACTGCGTTCCTCCGTCTTCTTCAAATTTATTTGTTAGAAAGGCACCCAACTCTCCCTGTTTGTTAACTTTCGCCTCGAAAGTTTCTATGTTAGAACCCTATGCATGAGTTGCGAAGCTATCTAATGT  >  USA300TCH1516_ALE/2539981‑2540122                                                                                                                                             |  gACGTTTTACGTCCAACTGCGTTCCTCCGTCTTCTTCAAATTTATTTGTTAGAAAGGCACCCAACTCTCCCTGTTTGTTAACTTTCGCCTCGAAAGTTTCTATGTTAGAACCCTATGCATGAGTTGCGAAGCTATCTAATg   <  1:3790/141‑1 (MQ=255)  aCGTTTTACGTCCAACTGCGTTCCTCCGTCTTCTTCAAATTTATTTGTTAGAAAGGCACCCAACTCTCCCTGTTTGTTAACTTTCGCCTCGAAAGTTTCTATGTTAGAACCCTATGCATGAGTTGCGAAGCTATCTAATGt  <  2:34590/141‑1 (MQ=255)                                                                                                                                             |  GACGTTTTACGTCCAACTGCGTTCCTCCGTCTTCTTCAAATTTATTTGTTAGAAAGGCACCCAACTCTCCCTGTTTGTTAACTTTCGCCTCGAAAGTTTCTATGTTAGAACCCTATGCATGAGTTGCGAAGCTATCTAATGT  >  USA300TCH1516_ALE/2539981‑2540122

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑