Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	2651580	2651663	84	2 [1]	[1] 2	fbp	Fructose‑1,6‑bisphosphatase class 3

ATTACTGAAAAAGAATTAAAAAAGAAGTATTTAGATTTACTATCCCAAAATTTTGATACTCCAGAAAAACTTGCAACTGAAATTATCAATTTAGAATCAATTTTAGAATTACCTAAAGGTACGGAACATTTCGTCAGCGATT  >  USA300TCH1516_ALE/2651439‑2651580                                                                                                                                             |  aTTACTGAAAAAGAATTAAAAAAGAAGTATTTAGATTTACTATCCCAAAATTTTGATACTCCAGAAAAACTTGCAACTGAAATTATCAATTTAGAATCAATTTTAGAATTACCTAAAGGTACGGAACATTTCGTCAGCGAt   <  2:36755/141‑1 (MQ=255)  ttACTGAAAAAGAATTAAAAAAGAAGTATTTAGATTTACTATCCCAAAATTTTGATACTCCAGAAAAACTTGCAACTGAAATTATCAATTTAGAATCAATTTTAGAATTACCTAAAGGTACGGAACATTTCGTCAGCGAtt  <  2:62706/141‑1 (MQ=255)                                                                                                                                             |  ATTACTGAAAAAGAATTAAAAAAGAAGTATTTAGATTTACTATCCCAAAATTTTGATACTCCAGAAAAACTTGCAACTGAAATTATCAATTTAGAATCAATTTTAGAATTACCTAAAGGTACGGAACATTTCGTCAGCGATT  >  USA300TCH1516_ALE/2651439‑2651580

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑