Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	2695745	2695856	112	2 [1]	[1] 2	USA300HOU_RS13870	Putative acetyltransferase

ACCAAGTATTACTGCCAATATGAATGGGTCCGGCTTTTTCAAAACCTTCATTTCTATGATGGAAATTAAGTGGATGTGTCGCTGTGTAGAATCCACAATTAGGTCCTATAAAAACATTATCGCCAATTGTAATCTGTCCACCATCCATAAAGTAACAATT  >  USA300TCH1516_ALE/2695604‑2695763                                                                                                                                             |                    aCCAAGTATTACTGCCAATATGAATGGGTCCGGCTTTTTCAAAACCTTCATTTCTATGATGGAAATTAAGTGGATGTGTCGCTGTGTAGAATCCACAATTAGGTCCTATAAAAACATTATCGCCAATTGTAATCTGTccac                     >  2:26124/1‑141 (MQ=255)                    aggAATGGGTCCAGCTTTTTCAAAACCTTCATTTCTATGATGGAAATTAAGTGGATGTGTCGCTGTGTAGAATCCACAATTAGGTCCTATAAAAACATTATCGCCAATTGTAATCTGTCCACCATCCATAAAGTAACAAtt  <  2:25735/139‑1 (MQ=255)                                                                                                                                             |                    ACCAAGTATTACTGCCAATATGAATGGGTCCGGCTTTTTCAAAACCTTCATTTCTATGATGGAAATTAAGTGGATGTGTCGCTGTGTAGAATCCACAATTAGGTCCTATAAAAACATTATCGCCAATTGTAATCTGTCCACCATCCATAAAGTAACAATT  >  USA300TCH1516_ALE/2695604‑2695763

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑