Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	530422	530525	104	2 [1]	[1] 2	[USA300HOU_RS02525]	[USA300HOU_RS02525]

AAGAAACATATCCGTCAGTTTTCATTGTTGAGTTAGATCAAGACAAACACAACTTTGAGAGAGTATCTTATACATACACTGATGTGTTAACTGAAAATGTTCAAGTTTCATTTGAAGAGGATAATCATCACGAATCAATTGCACACTAAATAAGACATATAGAGA  >  USA300TCH1516_ALE/530281‑530445                                                                                                                                             |                         aaGAAACATATCCGTCAGTTTTCATTGTTGAGTTAGATCAAGACAAACACAACTTTGAGAGAGTATCTTATACATACACTGATGTGTTAACTGAAAATGTTCAAGTTTCATTTGAAGAGGATAATCATCACGAATCAATTg                          <  2:1135/141‑1 (MQ=255)                         ttgttgAGTTAGATCAAGACAAACACAACTTTGAGAGAGTATCTTATACATACACTGATGTGTTAACTGAAAATGTTCAAGTTTCATTTGAAGAGGATAATCATCACGAATCAATTGCACACTAAATAAGACATATAgaga  >  1:45606/1‑141 (MQ=255)                                                                                                                                             |                         AAGAAACATATCCGTCAGTTTTCATTGTTGAGTTAGATCAAGACAAACACAACTTTGAGAGAGTATCTTATACATACACTGATGTGTTAACTGAAAATGTTCAAGTTTCATTTGAAGAGGATAATCATCACGAATCAATTGCACACTAAATAAGACATATAGAGA  >  USA300TCH1516_ALE/530281‑530445

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑