Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	545273	545303	31	2 [1]	[1] 2	tilS	tRNA(Ile)‑lysidine synthase

TATCGAATAATCGATTGCAGCGTTAGACAATCTAAGACTGTTTCTTAAATAAGGAGCAGTCTCTTTTATTTGTAATGATATAACTAAGACTTATACCATTTTTGAAAATTGTAAAAGTGAGGTGATGTTATGCAGTTAAATAGTAATGGTT  >  USA300TCH1516_ALE/545132‑545282                                                                                                                                             |           tATCGAATAATCGATTGCAGCGTTAGACAATCTAAGACTGTTTCTTAAATAAGGAGCAGTCTCTTTTATTTGTAATGATATAACTAAGACTTATACCATTTTTGAAAATTGTAAAAGTGAGGTGATGTTATGCAGTTAAAt            >  1:12149/1‑141 (MQ=255)           tCGATTGCAGCGTTAGACAATCTAAGACTGTTTCTTAAATAAGGAGCAGTCTCTTTTATTTGTAATGATATAACTAAGACTTATACCATTTTTGAAAATTGTAAAAGTGAGGTGATGTTATGCAGTTAAATAGTAATGGtt  >  1:1291/1‑141 (MQ=255)                                                                                                                                             |           TATCGAATAATCGATTGCAGCGTTAGACAATCTAAGACTGTTTCTTAAATAAGGAGCAGTCTCTTTTATTTGTAATGATATAACTAAGACTTATACCATTTTTGAAAATTGTAAAAGTGAGGTGATGTTATGCAGTTAAATAGTAATGGTT  >  USA300TCH1516_ALE/545132‑545282

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑