Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	605056	605146	91	2 [1]	[1] 2	USA300HOU_RS02905	putative epimerase/dehydratase

AAGTGTTAGATTCCCAGGTTTAATCTCGCATGTTAAAGAGCCAGGTGGCGGTACTACAGACTATGCTGTTGAAATATACTTCAAAGCAGTAAGAGAGGGTCATTATACAAGCTTCATAGATAAAGGCACGTATATGGATATGATGTATATGGATGATGCAATTGAAGCAATTATTAAA  >  USA300TCH1516_ALE/604915‑605092                                                                                                                                             |                                      aagTGTTAGATTCCCAGGTTTAATCTCGCATGTTAAAGAGCCAGGTGGCGGTACTACAGACTATGCTGTTGAAATATACTTCAAAGCAGTAAGAGAGGGTCATTATACAAGCTTCATAGATAAAGGCACGTATATGGatat                                       >  2:31982/1‑141 (MQ=255)                                      gagCCAGGTGGCGGTACTACAGACTATGCTGTTGAAATATACTTCAAAGCAGTAAGAGAGGGTCATTATACAAGCTTCATAGATAAAGGCACGTATATGGATATGATGTATATGGATGATGCAATTGAAGCAATTATTaaa  <  1:15083/141‑1 (MQ=255)                                                                                                                                             |                                      AAGTGTTAGATTCCCAGGTTTAATCTCGCATGTTAAAGAGCCAGGTGGCGGTACTACAGACTATGCTGTTGAAATATACTTCAAAGCAGTAAGAGAGGGTCATTATACAAGCTTCATAGATAAAGGCACGTATATGGATATGATGTATATGGATGATGCAATTGAAGCAATTATTAAA  >  USA300TCH1516_ALE/604915‑605092

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑