Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	630355	630374	20	2 [1]	[1] 2	hxlB	3‑hexulose‑6‑phosphate isomerase

TGGCGAATAGTTTTGCAATGCGCTTAAATCAGCTCGGCAAACAGGCACATGTTGTTGGAGAATCAACGACACCTGCGATTAAGTCGAATGATGTATTTGTAATTATCTCTGGTTCAGGTTCCACGGAACATTTAAGATTATTAGC  >  USA300TCH1516_ALE/630214‑630358                                                                                                                                             |     tGGCGAATAGTTTTGCAATGCGCTTAAATCAGCTCGGCAAACAGGCACATGTTGTTGGAGAATCAACGACACCTGCGATTAAGTCGAATGATGTATTTGTAATTATCTCTGGTTCAGGTTCCACGGAACATTTAAGattat      >  1:50891/1‑141 (MQ=255)     gAATAGTTTTGCAATGCGCTTAAATCAGCTCGGCAAACAGGCACATGTTGTTGGAGAATCAACGACACCTGCGATTAAGTCGAATGATGTATTTGTAATTATCTCTGGTTCAGGTTCCACGGAACATTTAAGATTATTAGc  >  1:37775/1‑141 (MQ=255)                                                                                                                                             |     TGGCGAATAGTTTTGCAATGCGCTTAAATCAGCTCGGCAAACAGGCACATGTTGTTGGAGAATCAACGACACCTGCGATTAAGTCGAATGATGTATTTGTAATTATCTCTGGTTCAGGTTCCACGGAACATTTAAGATTATTAGC  >  USA300TCH1516_ALE/630214‑630358

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑