Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	792962	793005	44	2 [1]	[0] 2	ltaS/ettA	Lipoteichoic acid synthase/Energy‑dependent translational throttle protein EttA

AAAGGTATATTATAAAGATCATTAGCATAGTCATCAAAGCCTTAACAAGTTTTATTTATAGTTGAAGCAACAATATATTAAATTATGACACTTAACGGTATCGATTTCTTTTGATTTCAAAAAGGTGTATAATGTATAGAA  >  USA300TCH1516_ALE/793006‑793146 |                                                                                                                                             aaaGGTATATTATAAAGATCATTAGCATAGTCATCAAAGCCTTAACAAGTTTTATTTATAGTTGAAGCAACAATATATTAAATTATGACACTTAACGGTATCGATTTCTTTTGATTTCAAAAAGGTGTATAATGTATAGaa  >  2:33180/1‑141 (MQ=255) aaaGGTATATTATAAAGATCATTAGCATAGTCATCAAAGCCTTAACAAGTTTTATTTATAGTTGAAGCAACAATATATTAAATTATGACACTTAACGGTATCGATTTCTTTTGATTTCAAAAAGGTGTATAATGTATAGaa  >  2:59910/1‑141 (MQ=255) |                                                                                                                                             AAAGGTATATTATAAAGATCATTAGCATAGTCATCAAAGCCTTAACAAGTTTTATTTATAGTTGAAGCAACAATATATTAAATTATGACACTTAACGGTATCGATTTCTTTTGATTTCAAAAAGGTGTATAATGTATAGAA  >  USA300TCH1516_ALE/793006‑793146

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑