Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1210124	1210204	81	2 [1]	[1] 2	pyrB	Aspartate carbamoyltransferase

GCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAGTTATGTTATTAAGAATTCAACATGAAAGGCATGGGCTTGCAGAAGAAACTAGATTTGCAGCAGATGATTATCATCAAAAGCATGGCTTAAATGAAGTACGCTATAACAAATTACAAGAACATGCTATTGTTATGCATCCGGCACCTGTGAATAGA  >  USA300TCH1516_ALE/1210145‑1210345                                                             |                                                                                                                                             gCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAGTTATGTTATTAAGAATTCAACATGAAAGGCATGGGCTTGCAGAAGAAACTAGATTTGCAGCAGATGATTATCATCAAAAGCATGGCTTAAATGaa                                                              <  1:16295/141‑1 (MQ=255)                                                             aTTCAACATGAAAGGCATGGGCTTGCAGAAGAAACTAGATTTGCAGCAGATGATTATCATCAAAAGCATGGCTTAAATGAAGTACGCTATAACAAATTACAAGAACATGCTATTGTTATGCATCCGGCACCTGTGAATaga  >  2:60539/1‑141 (MQ=255)                                                             |                                                                                                                                             GCACCTTATGTAAATATAGATGATGTTATAGAAACAGTAGATATAGTTATGTTATTAAGAATTCAACATGAAAGGCATGGGCTTGCAGAAGAAACTAGATTTGCAGCAGATGATTATCATCAAAAGCATGGCTTAAATGAAGTACGCTATAACAAATTACAAGAACATGCTATTGTTATGCATCCGGCACCTGTGAATAGA  >  USA300TCH1516_ALE/1210145‑1210345

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑