Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1331419	1331464	46	2 [1]	[1] 2	USA300HOU_RS06555	Monoacylglycerol lipase

ATAGAAAAGCTGGCATTAAAAATGTTAAAGTGAATCTTTATCATCATAAACGTCATGAAGTGTTATTTGAAAAAGATCATGACAAAATTTGGGAAGACTTGTTTAAATGGTTGAATCAATTTTATAAAAAATAAAGAAAGTGGAATTAAA  >  USA300TCH1516_ALE/1331456‑1331605          |                                                                                                                                             ataGAAAAGCTGGCATTAAAAATGTTAAAGTGAATCTTTATCATCATAAACGTCATGAAGTGTTATTTGAAAAAGATCATGACAAAATTTGGGAAGACTTGTTTAAATGGTTGAATCAATTTTATAAAAAATAAAGAAAGt           >  2:17551/1‑141 (MQ=255)          cTGGCATTAAAAATGTTAAAGTGAATCTTTATCATCATAAACGTCATGAAGTGTTATTTGAAAAAGATCATGACAAAATTTGGGAAGACTTGTTTAAATGGTTGAATCAATTTTATAAAAAATAAAGAAAGTGGAATTaaa  <  1:27055/141‑1 (MQ=255)          |                                                                                                                                             ATAGAAAAGCTGGCATTAAAAATGTTAAAGTGAATCTTTATCATCATAAACGTCATGAAGTGTTATTTGAAAAAGATCATGACAAAATTTGGGAAGACTTGTTTAAATGGTTGAATCAATTTTATAAAAAATAAAGAAAGTGGAATTAAA  >  USA300TCH1516_ALE/1331456‑1331605

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑