Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1580338	1580378	41	2 [1]	[1] 2	USA300HOU_RS07740	hypothetical protein

ATAAATTTTACAAAAGCAACTATACAATTTCATTTTTTCCTCTTCATCTGGATATGGTCCTTTGTTTATATATTGAAAAAAATACGCGCGATCTTTAAATTCATTAAATTCCATTTAAAAATCACCTACCACTTTTTTAATTTCAA  >  USA300TCH1516_ALE/1580374‑1580519      |                                                                                                                                             ataAATTTTACAAAAGCAACTATACAATTTCATTTTTTCCTCTTCATCTGGATATGGTCCTTTGTTTATATATTGAAAAAAATACGCGCGATCTTTAAATTCATTAAATTCCATTTAAAAATCACCTACCACTTTTTTAAt       >  1:58015/1‑141 (MQ=255)      ttttACAAAAGCAACTATACAATTTCATTTTTTCCTCTTCATCTGGATATGGTCCTTTGTTTATATATTGAAAAAAATACGCGCGATCTTTAAATTCATTAAATTCCATTTAAAAATCACCTACCACTTTTTTAATTTCaa  >  1:27906/1‑141 (MQ=255)      |                                                                                                                                             ATAAATTTTACAAAAGCAACTATACAATTTCATTTTTTCCTCTTCATCTGGATATGGTCCTTTGTTTATATATTGAAAAAAATACGCGCGATCTTTAAATTCATTAAATTCCATTTAAAAATCACCTACCACTTTTTTAATTTCAA  >  USA300TCH1516_ALE/1580374‑1580519

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑