Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1600555	1600640	86	2 [1]	[1] 2	[USA300HOU_RS07910]	[USA300HOU_RS07910]

CATTTTTTATGCTTTCTGATCAAATACTCTTCCAATTTAGAAATATTAATCAGAGTGCCTGTTGGTGAATAATCAATGTATAAATTTTCTACACCTAAATTATCTTTGCGGTAATATTTCAACCAGTTGTATACTGTACTTCTAC  >  USA300TCH1516_ALE/1600637‑1600781     |                                                                                                                                             cATTTTTTATGCTTTCTGATCAAATACTCTTCCAATTTAGAAATATTAATCAGAGTGCCTGTTGGTGAATAATCAATGTATAAATTTTCTACACCTAAATTATCTTTGCGGTAATATTTCAACCAGTTGTATACTGTACtt      >  2:51354/1‑141 (MQ=255)     ttttATGCTTTCTGATCAAATACTCTTCCAATTTAGAAATATTAATCAGAGTGCCTGTTGGTGAATAATCAATGTATAAATTTTCTACACCTAAATTATCTTTGCGGTAATATTTCAACCAGTTGTATACTGTACTTCTAc  >  2:19641/1‑141 (MQ=255)     |                                                                                                                                             CATTTTTTATGCTTTCTGATCAAATACTCTTCCAATTTAGAAATATTAATCAGAGTGCCTGTTGGTGAATAATCAATGTATAAATTTTCTACACCTAAATTATCTTTGCGGTAATATTTCAACCAGTTGTATACTGTACTTCTAC  >  USA300TCH1516_ALE/1600637‑1600781

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑