Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1662310	1662366	57	2 [1]	[1] 2	[pbpH]	[pbpH]

TTATTTTTATCATTTTTACCTAACTGCTTAAAGTAGTAGTTAATTACATCTCTACCTAAGTCTCCACCTGTTAACCATGGTGGTGGTACAGGCTGATTTGTATATACAATTGAAAACGCTAATTTTGGATCATCAATTGGCGCGTATCCTATATAAGTAGAG  >  USA300TCH1516_ALE/1662346‑1662507                      |                                                                                                                                             ttATTTTTATCATTTTTACCTAACTGCTTAAAGTAGTAGTTAATTACATCTCTACCTAAGTCTCCACCTGTTAACCATGGTGGTGGTACAGGCTGATTTGTATATACAATTGAAAACGCTAATTTTGGATCATCAATTGgc                       <  1:64274/141‑1 (MQ=255)                      aaCTGCTTAAAGTAGTAGTTAATTACATCTCTACCTAAGTCTCCACCTGTTAACCATGGTGGTGGTACAGGCTGATTTGTATATACAATTGAAAACGCTAATTTTGGAACATCAATTGGCGCGTATCCTATATAAGTagag  >  2:30023/1‑141 (MQ=255)                      |                                                                                                                                             TTATTTTTATCATTTTTACCTAACTGCTTAAAGTAGTAGTTAATTACATCTCTACCTAAGTCTCCACCTGTTAACCATGGTGGTGGTACAGGCTGATTTGTATATACAATTGAAAACGCTAATTTTGGATCATCAATTGGCGCGTATCCTATATAAGTAGAG  >  USA300TCH1516_ALE/1662346‑1662507

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑