Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	2020626	2020785	160	2 [1]	[1] 2	queE_2	7‑carboxy‑7‑deazaguanine synthase

ATGCATATCTCACACAACTGGGGAACAACTGATGAATTCGCAAATGTTGGCTTTGGCGCAATGAAGAAGCAACCACCGTTAAAAGCTAAGTTAAAATTATATGAACAAATGATTTCGAATGCACGTACATTATCAGAACAAGGAATGTTTGTATCTGCGGAAACAATGCTCAATCAAAGTACGCTACCACATTTACGAAAAATACATCAAGAAGTCGTTCATGATATGAAAT  >  USA300TCH1516_ALE/2020695‑2020926                                                                                            |                                                                                                                                             aTGCATATCTCACACAACTGGGGAACAACTGATGAATTCGCAAATGTTGGCTTTGGCGCAATGAAGAAGCAACCACCGTTAAAAGCTAAGTTAAAATTATATGAACAAATGATTTCGAATGCACGTACATTATCAGAACaa                                                                                             <  1:13462/141‑1 (MQ=255)                                                                                            tAAAATTATATGAACAAATGATTTCGAATGCCCGTACATTATCAGAACAAGGAGTGTTTGGATCTGCGGAAACAATGCTCAATCAAAGTACGCTACCACATTTACGAAAAATACATCAAGGAGTCGCTCATGATAGGAAAt  >  2:54898/1‑141 (MQ=255)                                                                                            |                                                                                                                                             ATGCATATCTCACACAACTGGGGAACAACTGATGAATTCGCAAATGTTGGCTTTGGCGCAATGAAGAAGCAACCACCGTTAAAAGCTAAGTTAAAATTATATGAACAAATGATTTCGAATGCACGTACATTATCAGAACAAGGAATGTTTGTATCTGCGGAAACAATGCTCAATCAAAGTACGCTACCACATTTACGAAAAATACATCAAGAAGTCGTTCATGATATGAAAT  >  USA300TCH1516_ALE/2020695‑2020926

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑