Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	2021805	2021964	160	2 [1]	[1] 2	USA300HOU_RS10190	putative acyl‑CoA thioester hydrolase

ACCACTTCCATTGAACTAGTCCCAGCGTATGAAACCATCGCTACGTATTGTAATATGTCCCCTGTTTTAATCGGCTTTAAGAAATCTACTGAGTCTGTAGATGCGGTAACTACTTGCGCACCAGCATGTTTCATAGCTGTGATTGCTGCAATTTCATC  >  USA300TCH1516_ALE/2021948‑2022105                  |                                                                                                                                             aCCACTTCCATTGAACTAGTCCCAGCGTATGAAACCATCGCTACGTATTGTAATATGTCCCCTGTTTTAATCGGCTTTAAGAAATCTACTGAGTCTGTAGATGCGGTAACTACTTGCGCACCAGCATGTTTCATAGCtgtg                   >  2:1249/1‑141 (MQ=255)                  aGTCCCAGCGTATGAAACCATCGCTACGTATTGTAATATGTCCCCTGTTTTACTCGGCTTTAAGAAATCTACTGAGTCTGTAGATGCGGTAACTACTTGCGCACCAGCATGTTTCATAGCTGTGATTGCTGCAATTtcatc  <  1:13899/141‑1 (MQ=255)                  |                                                                                                                                             ACCACTTCCATTGAACTAGTCCCAGCGTATGAAACCATCGCTACGTATTGTAATATGTCCCCTGTTTTAATCGGCTTTAAGAAATCTACTGAGTCTGTAGATGCGGTAACTACTTGCGCACCAGCATGTTTCATAGCTGTGATTGCTGCAATTTCATC  >  USA300TCH1516_ALE/2021948‑2022105

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑