Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	2061808	2061908	101	2 [1]	[1] 2	nos	Nitric oxide synthase oxygenase

TTTAAAAAAGAAGGCGTATCAATTGTCGATCATTTGACCGCTGCAAAGCAATTCGAACTATTCGAACGTAACGAAGCACAACAAGGTCGTCAAGTTACCGGAAAATGGTCTTGGCTAGCACCGCCATTATCTCCAACATTGACGTCAAATTATCATCACGGATATGACAATACAGTAAAAGATCCAA  >  USA300TCH1516_ALE/2061863‑2062049                                               |                                                                                                                                             tttAAAAAAGAAGGCGTATCAATTGTCGATCATTTGACCGCTGCAAAGCAATTCGAACTATTCGAACGTAACGAAGCACAACAAGGTCGTCAAGTTACCGGAAAATGGTCTTGGCTAGCACCGCCATTATCTCCAACATTg                                                <  2:51030/141‑1 (MQ=255)                                               aGCAATTCGAACTATTCGAACGTAACGAAGCACAACAAGGTCGTCAAGTTACCGGAAAATGGTCTTGGCTAGCACCGCCATTATCTCCAACATTGACGTCAAATTATCATCACGGATATGACAATACAGTAAAAGATCCaa  >  2:19443/1‑141 (MQ=255)                                               |                                                                                                                                             TTTAAAAAAGAAGGCGTATCAATTGTCGATCATTTGACCGCTGCAAAGCAATTCGAACTATTCGAACGTAACGAAGCACAACAAGGTCGTCAAGTTACCGGAAAATGGTCTTGGCTAGCACCGCCATTATCTCCAACATTGACGTCAAATTATCATCACGGATATGACAATACAGTAAAAGATCCAA  >  USA300TCH1516_ALE/2061863‑2062049

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑