Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	2507562	2507664	103	2 [1]	[1] 2	sarZ	HTH‑type transcriptional regulator SarZ

AGCCCTCTTGCTGAAATTTCTGTTAAGGTCTTTAATGAATTCAACATTTCAGAACGAGAAGCATCAGATATAATTAATAATTTGCGGAATTTTGTTTCTAAAAATTTTGACTATTCCGACAAAAAATAACTCCCTATCATAAGGTGATGGGCAGAAGTATGCATCG  >  USA300TCH1516_ALE/2507640‑2507805                          |                                                                                                                                             aGCCCTCTTGCTGAAATTTCTGTTAAGGTCTTTAATGAATTCAACATTTCAGAACGAGAAGCATCAGATATAATTAATAATTTGCGGAATTTTGTTTCTAAAAATTTTGACTATTCCGACAAAAAATAACTCCCTATCATa                           >  1:58355/1‑141 (MQ=255)                          aGGTCTTTAATGAATTCAACATTTCAGAACGAGAAGCATCAGATATAATTAATAATTTGCGGAATTTTGTTTCTAAAAATTTTGACTATTCCGACAAAAAATAACTCCCTATCATAAGGTGATGGGCAGAAGTATGCATCg  >  2:49024/1‑141 (MQ=255)                          |                                                                                                                                             AGCCCTCTTGCTGAAATTTCTGTTAAGGTCTTTAATGAATTCAACATTTCAGAACGAGAAGCATCAGATATAATTAATAATTTGCGGAATTTTGTTTCTAAAAATTTTGACTATTCCGACAAAAAATAACTCCCTATCATAAGGTGATGGGCAGAAGTATGCATCG  >  USA300TCH1516_ALE/2507640‑2507805

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑