Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	205527	205629	103	2 [0]	[1] 2	grsB	Gramicidin S synthase 2

AGTGAACGAATAGAAGTATTGGTACCGTTAAAGTATTTATTAATTGGTGGAGAAGTATTGAATGCTAAGTGGGTGGATTTGCTTAATCAAAAACCGAAGCATCCTCAAATTATTAATGGTTATGGACCAACTGAAAATACAACATTTACAACGACGTATAATATACCTAACAAAGTTCCAAATCGTATTCCTA  >  USA300TCH1516_ALE/205578‑205770                                                     |                                                                                                                                             aatGAACGAAAAGAAGTATAGGGACCGTTAACGTATTTACTAAAAGATGGAGAAATATTGAATGCTATGTTGGTGGAAAAAAAAAAAAAAAAACCGAAGCATCCTCAAATTATTAATGGTTATGGACCAACTGAAAATaca                                                      <  2:32588/139‑1 (MQ=255)                                                     aaGTATTGAATGCTAAGTGGGTGGATTTGCTTAATCAAAAACCGAAGCATCCTCAAATTATTAATGGTTATGGACCAACTGAAAATACAACATTTACAACGACGTATAATATACCTAACAAAGTTCCAAATCGTATTCCTa  <  1:42166/141‑1 (MQ=255)                                                     |                                                                                                                                             AGTGAACGAATAGAAGTATTGGTACCGTTAAAGTATTTATTAATTGGTGGAGAAGTATTGAATGCTAAGTGGGTGGATTTGCTTAATCAAAAACCGAAGCATCCTCAAATTATTAATGGTTATGGACCAACTGAAAATACAACATTTACAACGACGTATAATATACCTAACAAAGTTCCAAATCGTATTCCTA  >  USA300TCH1516_ALE/205578‑205770

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑