Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	297504	297576	73	2 [1]	[1] 2	tarK	Teichoic acid ribitol‑phosphate polymerase TarK

AGACTTGTTGATTAGTGATTATTCATCTTTAATATATGAATATGCAGTATTTAAAAAGCCGATGATTTTCTATGCATTTGACTTAGAAGATTACATTACGACGCGTGATTTCTATGAACCATTTGAATCATTTGTTCCAGGTAAAATT  >  USA300TCH1516_ALE/297570‑297717        |                                                                                                                                             aGACTTGTTGATTAGTGATTATTCATCTTTAATATATGAATATGCAGTATTTAAAAAGCCGATGATTTTCTATGCATTTGACTTAGAAGATTACATTACGACGCGTGATTTCTATGAACCATTTGAATCATTTGTTCCAgg         <  2:45451/141‑1 (MQ=255)        ttgATTAGTGATTATTCATCTTTAATATATGAATATGCAGTATTTAAAAAGCCGATGATTTTCTATGCATTTGACTTAGAAGATTACATTACGACGCGTGATTTCTATGAACCATTTGAATCATTTGTTCCAGGTAAAAtt  >  2:59583/1‑141 (MQ=255)        |                                                                                                                                             AGACTTGTTGATTAGTGATTATTCATCTTTAATATATGAATATGCAGTATTTAAAAAGCCGATGATTTTCTATGCATTTGACTTAGAAGATTACATTACGACGCGTGATTTCTATGAACCATTTGAATCATTTGTTCCAGGTAAAATT  >  USA300TCH1516_ALE/297570‑297717

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑