Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	449915	449998	84	2 [1]	[1] 2	speC_3	Exotoxin type C

CACAACCAATGCAATCTACTAAATCAGACACACCACAATCGCCAACCACAAAACAAGTACCAACAGAAATAAATCCTAAATTTAAAGATTTAAGAGCGTATTATACGAAACCAAGTTTAGAATTTAAAAATGAGATTGGTATTATTTTAAAAAAAT  >  USA300TCH1516_ALE/449984‑450139                |                                                                                                                                             cacaACCAATGCAATCTACTAAATCAGACACACCACAATCGCCAACCACAAAACAAGTACCAACAGAAATAAATCCTAAATTTAAAGATTTAAGAGCGTATTATACGAAACCAAGTTTAGAATTTAAAAATGAGATTGGta                 <  1:26131/141‑1 (MQ=255)                ctactaAATCAGACACACCACAATCGCCAACCACAAAACAAGTACCAACAGAAATAAATCCTAAATTTAAAGATTTAAGAGCGTATTATACGAAACCAAGTTTAGAATTTAAAAATGAGATTGGTATTATTTTAAAAAAAt  >  2:56076/1‑141 (MQ=255)                |                                                                                                                                             CACAACCAATGCAATCTACTAAATCAGACACACCACAATCGCCAACCACAAAACAAGTACCAACAGAAATAAATCCTAAATTTAAAGATTTAAGAGCGTATTATACGAAACCAAGTTTAGAATTTAAAAATGAGATTGGTATTATTTTAAAAAAAT  >  USA300TCH1516_ALE/449984‑450139

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑