Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	521190	521286	97	2 [1]	[1] 2	[dnaX_2]	[dnaX_2]

AAGGGAGTTTGTAATGAATGGATGAACAGCAACAATTGACGAATGCATATCATTCAAATAAATTATCGCATGCCTATTTATTTGAAGGTGATGATGCACAAACGATGAAACAAGTTGCGATTAATTTTGCAAAGCTTATTTTATGTCAAACAGATAGTCAATGTGAAACAAAGGTTAGTACATATAATCATCCAGACTTTATGTATATATCAACAACTGAGAA  >  USA300TCH1516_ALE/521205‑521427                                                                                   |                                                                                                                                             aaGGGAGTTTGTAATGAATGGATGAACAGCAACAATTGACGAATGCATATCATTCAAATAAATTATCGCATGCCTATTTATTTGAAGGTGATGATGCACAAACGATGAAACAAGTTGCGATTAATTTTGCAAAGCTTAttt                                                                                    >  1:38657/1‑141 (MQ=255)                                                                                   tGAAGGTGATGATGCACAAACGATGAAACAAGTTGCGATTAATTTTGCAAAGCTTATTTTATGTCAAACAGATAGTCAATGTGAAACAAAGGTTAGTACATATAATCATCCAGACGTTATGTATATATCAACAACTGAGaa  >  1:50700/1‑141 (MQ=255)                                                                                   |                                                                                                                                             AAGGGAGTTTGTAATGAATGGATGAACAGCAACAATTGACGAATGCATATCATTCAAATAAATTATCGCATGCCTATTTATTTGAAGGTGATGATGCACAAACGATGAAACAAGTTGCGATTAATTTTGCAAAGCTTATTTTATGTCAAACAGATAGTCAATGTGAAACAAAGGTTAGTACATATAATCATCCAGACTTTATGTATATATCAACAACTGAGAA  >  USA300TCH1516_ALE/521205‑521427

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑