Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	523329	523485	157	2 [1]	[1] 2	yabA/yfiC	Initiation‑control protein YabA/tRNA1(Val) (adenine(37)‑N6)‑methyltransferase

CGCAGTATCATTAGTTATAAAATGTAGCTGTTAAAAGTCAAAAATACATCGAATGTAGTTAGGCATATAATATAAAAAGAGTTTTCAATTACTCAATAGAAAAAGGTTGTCTTCATAGGAGTTAAAAATGTTAAAAGAGAATGAACGATTTGATCAACTAATCA  >  USA300TCH1516_ALE/523463‑523626                        |                                                                                                                                             cGCAGTATCATTAGTTATAAAATGTAGCTGTTAAAAGTCAAAAATACATCGAATGTAGTTAGGCATATAATATAAAAAGAGTTTTCAATTACTCAATAGAAAAAGGTTGTCTTCATAGGAGTTAAAAATGTTAAAAGAGaa                         >  1:38917/1‑141 (MQ=255)                        gTAGCTGTTAAAAGTCAAAAATACATCGAATGTAGTTAGGCATATAATATAAAAAGAGTTTTCAATTACTCAATAGAAGAAGGTTGTCTTCATAGGAGTTAAAAATGTTAAAAGAGAATGAACGATTTGATCAACTAATCa  >  2:50595/1‑141 (MQ=255)                        |                                                                                                                                             CGCAGTATCATTAGTTATAAAATGTAGCTGTTAAAAGTCAAAAATACATCGAATGTAGTTAGGCATATAATATAAAAAGAGTTTTCAATTACTCAATAGAAAAAGGTTGTCTTCATAGGAGTTAAAAATGTTAAAAGAGAATGAACGATTTGATCAACTAATCA  >  USA300TCH1516_ALE/523463‑523626

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑