New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | USA300TCH1516_ALE | = 1457718 | NA (NA) | 22 (0.090) | 13/138 | NT | NA | intergenic (+103/+28) | USA300HOU_RS07235/ybjG | hypothetical protein/Putative undecaprenyl‑diphosphatase YbjG |
? | USA300TCH1516_ALE | = 1457722 | NA (NA) | intergenic (+107/+24) | USA300HOU_RS07235/ybjG | hypothetical protein/Putative undecaprenyl‑diphosphatase YbjG |
Only 100 of 191 total aligned reads displayed.
CTTTAGGGTTGCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/1457618‑1457718 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaccacccgtGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACTATT < USA300TCH1516_ALE/1457722‑1457633 CTTTAGGGTTGCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACA < 1:2859320/91‑1 TTTAGGGTTGCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAA < 2:3017042/91‑1 TTAGGGTTGCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAA < 1:438109/91‑1 TAGGGTTGCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAAC < 2:470004/91‑1 AGGGTTGCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACC > 1:383099/1‑91 GGGTTGCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCGAGTAAGGAAGGCTTATAGCCGCAGAACAAACCA < 1:5606693/91‑1 GGGTTGCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCA > 1:1239538/1‑91 GGGTTGCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCA < 2:2478937/91‑1 GGTTGCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCAC > 1:4244563/1‑91 GGTTGCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCAC > 1:2701401/1‑91 GGTTGCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCAC > 1:4798923/1‑91 GGTTGCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCAC < 1:5083977/91‑1 GGTTGCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCAC > 1:2935750/1‑91 GGTTGCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGACAGTAAGGAAGGCTTATTGCCGCAGAACAAACCAC < 1:4270509/91‑1 GTTGCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACC < 2:130713/91‑1 GTTGCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACC < 1:4756174/91‑1 GTTGCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACC < 2:3546769/91‑1 GTTGCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACC < 2:4569307/91‑1 TTGCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCC > 1:3099295/1‑91 TGCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCCG < 1:5139666/91‑1 TGCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCCG < 2:1010424/91‑1 TGCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCCG < 2:218397/91‑1 TGCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCCG < 2:968673/91‑1 TGCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCCG < 1:119722/91‑1 GCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCCGT > 1:845436/1‑91 GCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCCGT > 2:1908989/1‑91 GCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCCGT > 2:3124780/1‑91 GCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCCGT > 1:2054024/1‑91 GCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCCGT < 1:2803530/91‑1 GCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTAAAGCCGCAGAACAAACCACCCGT > 1:3668463/1‑91 GGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCCGTGTG < 1:1097793/91‑1 GAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCCGTGTGA < 1:3867815/91‑1 AATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCCGTGTGA‑A < 1:3183032/91‑1 AATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCCGTGTGA‑A < 2:5349024/91‑1 AATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCCGTGTGA‑A < 2:1528938/91‑1 AATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCCGTGTGA‑A < 1:537773/91‑1 AATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCCGTGTGA‑A < 1:913744/91‑1 ATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAATCCACCCGTGTGA‑AC < 1:4535581/91‑1 ATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCCGTGTGA‑AC < 1:4534602/91‑1 ATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCCGTGTGA‑AC < 1:754939/91‑1 ATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCCGTGTGA‑AC < 2:1157462/91‑1 ATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGACAGTAAGGATGGCTTATAGCCGCAGAACAAACCACCCGTGTGA‑AC < 2:5446023/91‑1 ATAGTAGTGCAGTTGGCTCACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCCGTGTGA‑AC < 1:5554797/91‑1 TAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCCGTGTGA‑ACG < 2:1987471/91‑1 TAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCCGTGTGA‑ACG < 1:1719925/91‑1 TAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCCGTGTGA‑ACG < 1:2500536/91‑1 GTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCCGT‑TCACACGGGTGGTTTGTTCTGCGGCTATAAGCC > 1:81327/1‑91 TAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCCGTTCAC‑ACGGGTGGTTTGTACTGCGGCTATAAGCCTTCCTTACT > 1:1388434/1‑91 AAGGAAGGCTTATAGCCGCAGAACAAACCACCCGTTCAC‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAA > 2:2278426/1‑91 CGCAGAACAAACCACCCGT‑TCACACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCA > 2:4934531/1‑91 CAGAACAAACCACCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGC > 1:1955017/1‑91 AAACCACCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTG > 1:192015/1‑91 AAACCACCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTG > 2:3106847/1‑91 AACCACCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGC > 2:1480382/1‑91 AACCACCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGC > 2:1581521/1‑91 AACCACCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGC > 2:2679571/1‑91 AACCACCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGC > 2:3380212/1‑91 AACCACCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGC > 2:3423010/1‑91 AACCACCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGC > 1:4365777/1‑91 AACCACCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGC > 1:381102/1‑91 AACCACCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGC > 1:3699621/1‑91 ACCACCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCc > 2:919952/1‑90 ACCACCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCA < 2:3881810/91‑1 ACCACCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCA < 2:4226592/91‑1 ACCACCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCA < 2:698881/91‑1 ACCACCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCA < 2:1359322/91‑1 ACCACCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCA < 1:5076799/91‑1 ACCACCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCA < 1:935856/91‑1 CCACCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCAC < 2:1788886/91‑1 CCACCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCAC < 1:1583780/91‑1 CCACCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCAC > 2:3229361/1‑91 CCACCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCAC < 2:859048/91‑1 CACCCGTGTGA‑ACGGGTGGTTTGTTCTGCTGCTATAAGCCTTCCTTACTGGCCAGCTCTAAAAGGGCACTGCCAATTCAGCCAACTGCACT > 2:3907025/1‑91 CACCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACT < 1:3407247/91‑1 CACCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACT < 1:1284900/91‑1 CACCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACT < 1:4990030/91‑1 CACCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACT < 2:4630088/91‑1 ACCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTA < 2:3538103/91‑1 ACCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTA < 1:224904/91‑1 CCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTAC < 1:5203416/91‑1 CCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTAC < 1:2003634/91‑1 CCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTAC < 1:2627392/91‑1 CCCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTAC < 1:3163373/91‑1 CCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACT < 1:1026006/91‑1 CCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACT > 2:4113551/1‑91 CCGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACT > 1:912919/1‑91 CGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACTA > 2:3370839/1‑91 CGTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACTA > 1:1786479/1‑91 GTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATGAGCCTTCCTTCCTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACTAT > 2:3807152/1‑91 GTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACTAT > 2:37369/1‑91 GTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACTAT > 1:1260562/1‑91 GTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACTAT > 1:3772766/1‑91 GTGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACTAT > 2:1534160/1‑91 TGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGTCAAGTCAGCCAACTGCACTACTATT > 2:5241641/1‑91 TGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACTATT > 1:493610/1‑91 TGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACTATT < 1:3024713/91‑1 TGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACTATT < 2:564837/91‑1 TGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACTATT < 1:5534089/91‑1 TGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACTATT < 1:669962/91‑1 TGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACTATT > 1:329499/1‑91 CTTTAGGGTTGCTGGAATAGTAGTGCAGTTGGCTGACTTGTCAGTGCCCTTTTAGGGCTGGCCAGTAAGGAAGGCTTATAGCCGCAGAACAAACCACCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/1457618‑1457718 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaccacccgtGTGA‑ACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACTATT < USA300TCH1516_ALE/1457722‑1457633 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |