New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | USA300TCH1516_ALE | = 1657692 | 205 (0.710) | 10 (0.040) | 9/130 | NT | 5.0% | intergenic (‑15/+37) | comGA/USA300HOU_RS08250 | ComG operon protein 1/putative metallo‑hydrolase |
? | USA300TCH1516_ALE | = 1657702 | 210 (0.900) | intergenic (‑25/+27) | comGA/USA300HOU_RS08250 | ComG operon protein 1/putative metallo‑hydrolase |
ACTTACTTCATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAACACCTCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/1657588‑1657692 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaacacctcctacGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACATTT < USA300TCH1516_ALE/1657702‑1657613 ACTTACTTCATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAA < 1:2410175/91‑1 ACTTACTTCATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAA > 2:3034551/1‑91 ACTTACTTCATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAA > 2:1616422/1‑91 ACTTACTTCATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAA > 1:3931061/1‑91 ACTTACTTCATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAA > 1:3992916/1‑91 ACTTACTTCATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAA < 1:2411767/91‑1 ACTTACTTCATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAA > 1:5463093/1‑91 CTTACTTCATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCCAAA > 2:3919534/1‑91 CTTACTTCATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAA > 1:4420430/1‑91 CTTACTTCATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAA > 2:3009052/1‑91 CTTACTTCATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAA > 2:187744/1‑91 TTACTTCATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAA > 2:2230782/1‑91 TACTTCATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAA > 2:4647452/1‑91 ACTTCATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAA < 2:3834589/91‑1 CTTCATTTTTAACTGGAATAAAATGTTCATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAAC < 1:4931447/91‑1 CTTCATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAAC < 1:4931267/91‑1 CTTCATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAAC < 1:4796571/91‑1 CTTCATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAAC < 2:1144336/91‑1 CTTCATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAAC < 1:5556106/91‑1 CTTCATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAAC > 2:1382111/1‑91 CTTCATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAAC < 2:1297658/91‑1 CTTCATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAAC < 1:2658418/91‑1 CTTCATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTAAAAAAAAC < 2:2305929/91‑1 TTCATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAACA > 1:5049307/1‑91 TCATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAACAC > 1:3328891/1‑91 TCATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATATCTATCGCTTTATTAATTATTTCTTGAAATAAAAAAAAAAAAAAAACAC < 2:1922828/91‑1 TCATTTTTAACTGGAATAAAATGTACATCACACGCTTTCATTTCTATCGCTGTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAACAC < 2:3963510/91‑1 TCATTTTTAACCGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAAAAAAAAAAAAAAAACAC < 2:5635987/91‑1 TCATTTAGAACTGGACTAAAATGTACATCACTCGCTTTCATTTCTATCGCTTAATTAATTATTTCTTGAAATAGAATCTTCAAAAAAACAC < 2:4344718/91‑1 CATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAACACC < 1:383744/91‑1 CATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAACACC < 1:2574652/91‑1 CATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAACACC < 1:384657/91‑1 TTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAACACCTC < 2:4463965/91‑1 TTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAACACCTC > 2:908829/1‑91 TTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAACACCTC < 1:765871/91‑1 TTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAACACCTC < 1:3159047/91‑1 TTTTAACTGGAATAACATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGACATAGAATCTTCAAAAAAACACCTCC > 2:2156417/1‑91 TTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAACACCTCC < 1:312060/91‑1 TTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAACACCTCC > 2:485570/1‑91 TTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAACACCTCCTt > 1:4091312/1‑90 TTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAACACCTCCTA < 1:1564665/91‑1 TTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAACACCTCCTA < 1:5442874/91‑1 AATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAACACCTCCTACGTGATTA < 1:3325531/91‑1 TAAAATGTATATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAACACCTCCTACGTGATTAT‑A < 2:5344352/91‑1 TAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAACACCTCCTACGTGATTAT‑A < 1:886605/91‑1 TAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAACACCTCCTACGTGATTAT‑A < 1:1978391/91‑1 ATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAACACCTCCTACGTGATTAT‑ATGTAGGAGGT < 1:2488366/91‑1 TCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAACACCTCCTACGTGATTAT‑ATGTAGGAGGTG < 2:515042/91‑1 CACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAACACCTCCTACGTGATTAT‑ATGTAGGAGGTGT > 1:3919534/1‑91 AATTATTTCTTGAAATAGAATCTTCAAAAAAACACCTCCTACAT‑ATAATCACGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATA > 1:1428879/1‑91 TTGAAATAGAATCTTCAAAAAAACACCTCCTACAT‑ATAATCACGTAGGAGGTGTTTTCTTGAAGCTTCTATTTCAAGAAATAATTAATAAA > 2:1750436/1‑91 TAGAATCTTCAAAAAAACACCTCCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATA < 1:219632/91‑1 AAAAAACACCTCCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGC < 2:1468505/91‑1 AAAAACACCTCCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCG > 2:2994266/1‑91 AAAAACACCTCCTACAT‑ATAATCACGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCG > 1:3869330/1‑91 AAACACCTCCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAG > 1:887213/1‑91 AAACACCTCCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAG > 2:2468661/1‑91 AAACACCTCCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAG > 1:3297456/1‑91 AAACACCTCCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAG > 1:2843595/1‑91 ACACCTCCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTG > 2:4583960/1‑91 ACACCTCCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTG < 2:4150903/91‑1 ACACCTCCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTG > 2:4583860/1‑91 ACACCTCCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTG < 1:2168434/91‑1 ACACCTCCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTG > 2:918772/1‑91 ACACCTCCTACGTGATTAT‑ATGTAGGAGGAGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAACCGAGTG > 2:4011925/1‑91 CACCTCCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGA > 1:4085742/1‑91 CACCTCCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGA > 1:3195987/1‑91 ACCTCCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGAT > 1:4539125/1‑91 ACCTCCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGAT > 1:4539341/1‑91 CCTCCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATG < 2:2517330/91‑1 CCTCCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATG > 1:4125902/1‑91 CCTCCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATG > 1:354604/1‑91 CCTCCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATG > 1:1993943/1‑91 CCTCCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATG > 1:3034551/1‑91 CCTCCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATG < 1:3027125/91‑1 CCTCCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCGATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATG > 1:4399256/1‑91 CTCCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGT < 1:3541921/91‑1 TCCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTA > 1:1701681/1‑91 TCCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTA > 1:1305105/1‑91 CCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTAC < 2:661514/91‑1 CCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTAC > 2:705922/1‑91 CCTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTAC < 2:224994/91‑1 CTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTTATGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACA > 2:4014182/1‑91 CTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACA > 1:2652345/1‑91 CTACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACA < 1:963751/91‑1 TACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACAT < 2:967534/91‑1 TACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACAT < 2:810105/91‑1 TACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACAT < 2:294564/91‑1 TACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACAT < 2:2718983/91‑1 TACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACAT < 1:4535789/91‑1 TACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACAT < 1:2723303/91‑1 TACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACAT < 1:1745796/91‑1 ACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACATT < 2:4100011/91‑1 ACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACATT > 2:25627/1‑91 ACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACATT > 2:1342608/1‑91 ACGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACATT < 1:1330582/91‑1 CGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACATTT > 1:3469899/1‑91 CGTGATTAT‑ATGTAGGAGGTGTGTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACATTT < 2:2872721/91‑1 ACTTACTTCATTTTTAACTGGAATAAAATGTACATCACTCGCTTTCATTTCTATCGCTTTATTAATTATTTCTTGAAATAGAATCTTCAAAAAAACACCTCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/1657588‑1657692 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaacacctcctacGTGATTAT‑ATGTAGGAGGTGTTTTTTTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACATTT < USA300TCH1516_ALE/1657702‑1657613 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |