New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | USA300TCH1516_ALE | = 127978 | 302 (1.050) | 16 (0.060) | 10/144 | NT | 5.3% | intergenic (+198/+131) | lctP_1/spa | L‑lactate permease/Immunoglobulin G‑binding protein A |
? | USA300TCH1516_ALE | = 128000 | 301 (1.170) | intergenic (+220/+109) | lctP_1/spa | L‑lactate permease/Immunoglobulin G‑binding protein A |
Only 100 of 404 total aligned reads displayed.
TAATCAGAGTAGAAAGTGTTGAGGCGTTTCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTAAAATTGGTTTGGATAAAATGATATCTAT > USA300TCH1516_ALE/127910‑128089 | aagcAGAGTATAAAGTGTTGAGGCGTTTCAGAAGTTGTTTAGAAAAGAAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCg < 2:4483603/88‑1 (MQ=255) cAGAGTAGAAAGTGTTGAGGCGTTTCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCgtgc < 2:2279883‑M2/91‑5 (MQ=255) cAGAGTAGAAAGTGTTGAGGCGTTTCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTACTCgtgc < 2:4372787‑M2/91‑5 (MQ=255) gagTAGAAAGTGTTGAGGCGTTTCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCgtgcat < 2:91789‑M2/91‑7 (MQ=255) gagTAGAAAGTGTTGAGGCGTTTCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCgtgcat < 2:1337304‑M2/91‑7 (MQ=255) agTAGAAAGTGTTGAGGCGTTTCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCgtgcatt > 2:784953‑M2/1‑84 (MQ=255) gTAGAAAGTGTTGAGGCGTTTCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCgtgcattt > 1:1967949‑M2/1‑83 (MQ=255) gTAGAAAGTGTTGAGGCGTTTCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCgtgcattt > 1:713052‑M2/1‑83 (MQ=255) aGAAAGTGTTGAGGCGTTTCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAg < 1:5152187/91‑1 (MQ=255) gAAAGTGTTGAGGCGTTTCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAga > 1:322007/1‑91 (MQ=255) gAAAGTGTTGAGGCGTTTCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAga < 1:3696156/91‑1 (MQ=255) gAAAGTGTTGAGGCGTTTCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAga > 2:4694659/1‑91 (MQ=255) aaaGTGTTGAGGCGTTTCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAgat > 1:2045326/1‑91 (MQ=255) aaGTGTTGAGGCGTTTCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAgatg < 1:2404761/91‑1 (MQ=255) aaGTGTTGAGGCGTTTCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAgatg > 1:1358177/1‑91 (MQ=255) aaGTGTTGAGGCGTTTCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAgatg > 1:1152366/1‑91 (MQ=255) tgtTGAGGCGTTTCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGAtt > 1:417849/1‑91 (MQ=255) tgtTGAGGCGTTTCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGAtt < 2:3190499/91‑1 (MQ=255) ttGAGGCGTTTCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCt > 2:2862626/1‑91 (MQ=255) tGAGGCGTTTCAGAAGTTGTTTAGAAAAGTAACTAAAATAAAAAATGCACTGAGCAACATAAGATGTTGCTCGTGCATTTAGATGATTCtt < 1:5527342/91‑1 (MQ=255) gAGGCGTTTCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTa > 2:2864088/1‑91 (MQ=255) aGGCGTTTCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTAt > 2:1062158/1‑91 (MQ=255) aGGCGTTTCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTAt > 1:955643/1‑91 (MQ=255) aGGCGTTTCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTAt > 1:4900089/1‑91 (MQ=255) ggCGTTTCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATc > 1:3382223/1‑91 (MQ=255) gCGTTTCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCa > 2:3539970/1‑91 (MQ=255) gCGTTTCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCa < 1:1602108/91‑1 (MQ=255) tttCAGAAGTTGTTTAGAAAAAAAAAAAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCAttt < 2:4084946/91‑1 (MQ=255) ttCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTc < 2:2467991/91‑1 (MQ=255) tCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCa < 1:3155547/91‑1 (MQ=255) cAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAGTGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCaa > 2:3342378/1‑91 (MQ=255) aGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCaaa > 2:208331/1‑91 (MQ=255) aGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATaa > 1:823788/1‑91 (MQ=255) gttgttTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAg < 2:1408570/91‑1 (MQ=255) ttgttTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGa > 2:30610/1‑91 (MQ=255) ttgttTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGa > 2:1517634/1‑91 (MQ=255) ttgttTAGAAAAGTAAGTAAAAGAAAAAATGCACGGAGCAACAAAAGATGTTGCGCGTGCATTTAGATGATTCTTATCATTTCAAATAAGa < 1:4643130/91‑1 (MQ=255) tttAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAAtg < 1:2707753/91‑1 (MQ=255) tAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAAtgtg > 1:582865/1‑91 (MQ=255) aGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATgtgt < 1:5293709/91‑1 (MQ=255) gAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGtt < 2:1604/91‑1 (MQ=255) aagtaagtAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAAt < 1:4317340/91‑1 (MQ=255) gtaagtaaAATAGAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCa < 2:3596514/91‑1 (MQ=255) gtaagtaaAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCa > 1:4575415/1‑91 (MQ=255) gtaagtaaAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGACTCTTATCATTTCAAATAAGAATGTGTTAATCa > 2:4293569/1‑91 (MQ=255) taagtaaAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCaa > 2:1194115/1‑91 (MQ=255) taagtaaAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCaa < 2:4998796/91‑1 (MQ=255) agtaaAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACg > 1:2257592/1‑91 (MQ=255) agtaaAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTCCAAATAAGAATGTGTTAATCAACg > 2:2671747/1‑91 (MQ=255) taaaataaaaAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGta > 1:3776034/1‑91 (MQ=255) taaaataaaaAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGta > 2:1711565/1‑91 (MQ=255) aaaaaaTGCACTGAGCAACAAAAGATGTTGCTCgtgcattttttattttacttacttttctaaacaacttctgaaacgcctcaacactttc < 2:542898‑M2/91‑59 (MQ=255) aaaaaTGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGt < 2:4452008/91‑1 (MQ=255) aaaaaTGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGt < 2:2799733/91‑1 (MQ=255) aaaaaTGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGt > 1:2919689/1‑91 (MQ=255) aaaaTGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGtt > 1:1033231/1‑91 (MQ=255) aaaTGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAGGAATGTGTTAATCAACGTATATAAGTTa > 2:4791767/1‑91 (MQ=255) aaaTGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTa < 2:5600343/91‑1 (MQ=255) aaTGCACTGAGCATCAAAAGATGTTGAGCGTGCATTTATATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTaa < 2:1980230/91‑1 (MQ=255) aaTGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTaa < 2:341424/91‑1 (MQ=255) aaTGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTaa < 1:188004/91‑1 (MQ=255) aaTGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTaa < 2:313859/91‑1 (MQ=255) aTGCGCTGAGCAACAGAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTaaa < 1:296020/91‑1 (MQ=255) aTGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTaaa > 1:4084060/1‑91 (MQ=255) aTGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTaaa < 1:5205052/91‑1 (MQ=255) gCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTAAAAt > 2:5111446/1‑91 (MQ=255) cACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTAAAAtt > 1:3513030/1‑91 (MQ=255) aCTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTAAAATTg > 2:4216542/1‑91 (MQ=255) cTGAGCAACAAAAGATGTTGCTCgtgcattttttattttactttcttttctaaacaactttttaaacgcctcatcactttctactctgatt < 2:611555‑M2/91‑69 (MQ=255) cTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTAAAATTgg < 1:5397564/91‑1 (MQ=255) tGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTAAAATTGGt < 1:2619091/91‑1 (MQ=255) tGAGCAACAAAAGATGTTGCTCGTGCATTCAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTAAAATTGGt > 2:1573864/1‑91 (MQ=255) gAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTAAAATTGGtt < 1:1302582/91‑1 (MQ=255) gAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTAAAATTGGtt < 1:5030474/91‑1 (MQ=255) aGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTAAAATTGGttt < 1:1783244/91‑1 (MQ=255) caacaaAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTAAAATTGGTTTgg < 2:3961260/91‑1 (MQ=255) caacaaAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTAAAATTGGTTTgg < 1:5583539/91‑1 (MQ=255) aacaaAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCCACGTATATAAGTTAAAATTGGTTTGGa > 2:2644971/1‑91 (MQ=255) aacaaAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTAAAATTGGTTTGGa < 2:4879621/91‑1 (MQ=255) acaaAAGATGTTGCTCgtgcattttttattttacttacttttctaaacaacttctgaaacgcctcaacactttctactctgattacatata < 1:4025157‑M2/91‑76 (MQ=255) acaaAAGATGTTGCTCgtgcattttttattttacttacttttcaaaacaacttctgaaacgcctcaacactttctactctgattacatata < 1:4411583‑M2/91‑76 (MQ=255) acaaAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTAAAATTGGTTTGGAt > 1:2527305/1‑91 (MQ=255) acaaAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTAAAATTGGTTTGGAt > 2:4037608/1‑91 (MQ=255) acaaAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTAAAATTGGTTTGGAt < 1:475541/91‑1 (MQ=255) caaAAGATGTTGCTCgtgcattttttattttacttacttttctaaacaacttctgaaacgcctcaacactttctactctgattacatatat < 2:55387‑M2/91‑77 (MQ=255) caaAAGATGTTGCTCggtgcattttttattttacttacttttctaaacaacttctgaaacgcctcaacactttctactctgattacatata < 2:3787586‑M2/91‑77 (MQ=255) aaaaGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTAAAATTGGTTTGGATaa < 2:3702495/91‑1 (MQ=255) aaaGATGTTGCTCGTGCATTTAGATGATTTTTATCATTGCAAATAAGAATGTGTTAAGCAACGTATATCAGTTACACTTGGTTTGGATaaa > 2:1455777/1‑91 (MQ=255) aaaGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTAAAATTGGTTTGGATaaa > 2:2174922/1‑91 (MQ=255) gATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTAAAATTGGTTTGGATAAAATg < 1:313369/91‑1 (MQ=255) gATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTAAAATTGGTTTGGATAAAATg < 2:1898057/91‑1 (MQ=255) tGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTAAAATTGGTTTGGATAAAATGat > 2:4634915/1‑91 (MQ=255) gTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTAAAATTGGTTTGGATAAAATGata < 2:3471134/91‑1 (MQ=255) gTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTAAAATTGGTTTGGATAAAATGata > 2:3644195/1‑91 (MQ=255) gTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAACGTGTTAATCAACGTATATAAGTTAAAATTGGTTTGGATAAAATGata > 2:2584176/1‑91 (MQ=255) gTTGCTCGTGCATATAGATGATTCTTATCAGTTCAAATAAGAATGTGTCAATCAACGTATATAAGTTAAAATTGGTTTGGATATAATGata > 1:4484712/1‑91 (MQ=255) ttGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTAAAATTGGTTTGGATCAAATGatat > 2:5360589/1‑91 (MQ=255) tGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTAAAATTGGTTTGGATAAAATGAtatc < 1:2143822/91‑1 (MQ=255) tGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTAAAATTGGTTTGGATAAAATGAtatc < 1:1088212/91‑1 (MQ=255) cTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTAAAATTGGTTTGGATAAAATGAtatcta > 1:857646/1‑91 (MQ=255) | TAATCAGAGTAGAAAGTGTTGAGGCGTTTCAGAAGTTGTTTAGAAAAGTAAGTAAAATAAAAAATGCACTGAGCAACAAAAGATGTTGCTCGTGCATTTAGATGATTCTTATCATTTCAAATAAGAATGTGTTAATCAACGTATATAAGTTAAAATTGGTTTGGATAAAATGATATCTAT > USA300TCH1516_ALE/127910‑128089 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |