New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | USA300TCH1516_ALE | 1181842 = | 245 (0.850) | 13 (0.050) | 8/144 | NT | 6.1% | intergenic (+409/+65) | USA300HOU_RS05885/USA300TCH1516_01103 | hypothetical protein/tRNA‑Arg |
? | USA300TCH1516_ALE | 1181881 = | 178 (0.690) | intergenic (+448/+26) | USA300HOU_RS05885/USA300TCH1516_01103 | hypothetical protein/tRNA‑Arg |
Only 100 of 280 total aligned reads displayed.
CTTATGCGGGGGACGTTTTGGTGACGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTTAGAAGGCCATTGCTCTATCCAGCTGAG > USA300TCH1516_ALE/1181791‑1181971 | cTTATGCGGGGGACGTTTTGGTGACGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTtttgtttg > 1:985722/1‑91 (MQ=255) cTTATGCGGGGGACGTTTTGGTGACGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTtttgtttg < 2:5199105/91‑1 (MQ=255) cTTATGCGGGGGACGTTTTGGTGACGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTtttgtttg < 1:1975546/91‑1 (MQ=255) ttATGCGGGGGACGTTTTGGTGACGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTgg > 1:3383354/1‑91 (MQ=255) ttATGCGGGGGACGTTTTGGTGACGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTgg > 1:2965545/1‑91 (MQ=255) tATGCGGGGGACGTTTTGGTGACGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGt > 1:1889597/1‑91 (MQ=255) aTGCGGGGGACGTTTTGGTGACGCCTCATACTATATTAATGAAATTCAAAACAACAAGAGCCCCGTAATCACGGAACTCTTTTGATTGGTa > 2:2548172/1‑91 (MQ=255) tGCGGGGGACGTTTTGGTGACGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTaa < 1:1171165/91‑1 (MQ=255) tGCGGGGGACGTTTTGGTGACGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTaa < 2:601517/91‑1 (MQ=255) gCGGGGGACGTTTTGGTGACGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAAt > 1:2863946/1‑91 (MQ=255) gggtgACGTTTTGGTGACGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGc < 2:5523385/91‑1 (MQ=255) gtggACGGGTTGGTGACGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGGTTGGTAATGCg < 2:5618723/89‑1 (MQ=255) ggggACGTTTTGGTGACGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCg < 2:3710460/91‑1 (MQ=255) ggACGTTTTGGTGACGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGta < 1:1279264/91‑1 (MQ=255) ggACGTTTTGGTGACGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGta > 1:1380498/1‑91 (MQ=255) ggACGTTTTGGTGACGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGta < 2:666577/91‑1 (MQ=255) ggACATTTTGGTGACGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGta < 2:2507603/91‑1 (MQ=255) gACGTTTTGGTGACGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGtat < 2:1290082/91‑1 (MQ=255) gcGTTTTGGTGACGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGtata < 1:5116896/90‑1 (MQ=255) gTTTTGGTGACGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATaaa > 1:4542913/1‑91 (MQ=255) ttttGGTGACGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATaaaa > 1:857068/1‑91 (MQ=255) tttGGTGACGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATaaaaa > 2:5148823/1‑91 (MQ=255) tttGGTGACGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATaaaaa > 2:4881645/1‑91 (MQ=255) ttGGTGACGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAAt < 2:1994103/91‑1 (MQ=255) tGGTGACGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATa < 2:2780582/91‑1 (MQ=255) tGGTGACGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATa < 1:1838277/91‑1 (MQ=255) ggTGACGCATCATACTATATTACTGAAATTTAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATAc < 1:4352023/91‑1 (MQ=255) gACGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCta < 1:475768/91‑1 (MQ=255) aaCGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCta < 2:5031334/90‑1 (MQ=255) atcatACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAAc < 1:3791742/91‑1 (MQ=255) atcatACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAAc < 1:4496519/91‑1 (MQ=255) catACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGt < 2:1390385/91‑1 (MQ=255) catACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGt < 1:3930379/91‑1 (MQ=255) tataTTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTgg < 1:1686534/91‑1 (MQ=255) tatTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTggga > 1:1616508/1‑91 (MQ=255) atTACTGAAATTCAAAACAACAAGAGCCCCGTAAATACGGAACTCTTTTGTTTGGTCATGCGTATCAAAATACCTATAAACGTCCTgggtg < 2:4726642/91‑3 (MQ=255) atTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTgggag < 2:1256265/91‑1 (MQ=255) ttACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTgggagg < 1:28386/91‑1 (MQ=255) ttACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTgggagg < 2:4959127/91‑1 (MQ=255) tACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTgggaggg > 2:2694861/1‑91 (MQ=255) aCTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTgggaggga < 1:2158647/91‑1 (MQ=255) ttCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAAc > 1:2051825/1‑91 (MQ=255) ttCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAAc < 2:4216385/91‑1 (MQ=255) ccaaacaaaagagttccgtgattacggggctctttttgtttGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAAccc > 1:5518260‑M2/42‑91 (MQ=255) AAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAAccccc > 2:4536142‑M1/1‑91 (MQ=255) AAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAAccccc < 1:1358773‑M1/91‑1 (MQ=255) AAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAAccccc < 1:365760‑M1/91‑1 (MQ=255) ACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCccga < 2:3077270‑M1/91‑1 (MQ=255) ACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCccga < 2:4061439‑M1/91‑1 (MQ=255) ACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCccga < 2:1214536‑M1/91‑1 (MQ=255) ACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCccga > 2:89251‑M1/1‑91 (MQ=255) CAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCccgac < 1:1461954‑M1/91‑1 (MQ=255) CAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCccgac > 1:4300092‑M1/1‑91 (MQ=255) AAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCccgacc > 1:731826‑M1/1‑91 (MQ=255) AAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCccgaccg > 1:1042026‑M1/1‑91 (MQ=255) AAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCccgaccg > 2:3839739‑M1/1‑91 (MQ=255) AAAAGAGACCCATAATCACGGAACTCTTTTGTTTGGTACTGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCccgaccg < 1:5431399‑M1/91‑1 (MQ=255) AAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCtcgaccga < 1:4089630‑M1/91‑1 (MQ=255) AAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCccgaccga < 2:4688638‑M1/91‑1 (MQ=255) AAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCccgaccga < 2:3232566‑M1/91‑1 (MQ=255) AAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGAt < 1:543651‑M1/91‑1 (MQ=255) AAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGAt > 2:1776875‑M1/1‑91 (MQ=255) gagttccgtgattacggggctctttttgtttGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATg > 1:727965‑M2/32‑91 (MQ=255) agagCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATg < 1:682209/91‑1 (MQ=255) agagCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATg > 2:3332743/1‑91 (MQ=255) gagCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATgg > 2:4023309/1‑91 (MQ=255) gttccgtgattacggggctctttttgtttGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGc > 2:4116321‑M2/30‑91 (MQ=255) gttccgtgattacggggctctttttgtttGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGc > 2:3815536‑M2/30‑91 (MQ=255) agttccgtgattacggggctcttttgtttGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGc > 1:385895‑M2/30‑91 (MQ=255) agCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGc > 1:1252830/1‑91 (MQ=255) agCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGc > 2:3910483/1‑91 (MQ=255) ccccGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCtt > 2:2430394/1‑91 (MQ=255) cccGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTTa > 1:3236330/1‑91 (MQ=255) cccGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTTa > 2:1660515/1‑91 (MQ=255) cccGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTTa > 2:1747172/1‑91 (MQ=255) cccGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTTa > 1:2560523/1‑91 (MQ=255) cGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTTAGa > 1:2758503/1‑91 (MQ=255) cGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTTAGa < 1:5530605/91‑1 (MQ=255) tAACCACGGAACTCTTGTGTTTGGTAATGCGTATAAAAATACCTATAATCGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTTAGAAg < 2:4337435/91‑1 (MQ=255) aaTCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTTAGAAgg < 1:2475188/91‑1 (MQ=255) aTCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTTAGAAGGc < 1:501953/91‑1 (MQ=255) aCGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTTAGAAGGCCAt > 2:3160574/1‑91 (MQ=255) cGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTTAGAAGGCCAtt > 2:3531296/1‑91 (MQ=255) cGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTTAGAAGGCCAtt > 1:320681/1‑91 (MQ=255) cGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTTAGAAGGCCAtt > 1:3582555/1‑91 (MQ=255) cGGAACTCTTTTGTTTGCTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTTAGAAGGCCAtt > 1:5475735/1‑91 (MQ=255) aaCTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTTAGAAGGCCATTGct > 2:712312/1‑91 (MQ=255) aCTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTTAGAAGGCCATTGctc > 1:535754/1‑91 (MQ=255) ctctTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTTAGAAGGCCATTGctct > 2:2103687/1‑91 (MQ=255) tctTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTTAGAAGGCCATTGCTCTa < 1:382109/91‑1 (MQ=255) ctTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTTAGAAGGCCATTGCTCTAt < 1:3465832/91‑1 (MQ=255) ctTTTGTTTGGTAATGCGTATAAAAATACCTAGAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTTAGAAGGCCATTGCTCTAt < 1:3628409/91‑1 (MQ=255) ttttgtttGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTTAGAAGGCCATTGCTCTATc > 2:3393740‑M2/9‑91 (MQ=255) tttgtttGGTGATGCGTATAAAAATACCTATAAGCGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTCAGAAGGCCATTGCTCTATcc < 1:5157984‑M2/84‑1 (MQ=255) tttgtttGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTTAGAAGGCCATTGCTCTATcc > 1:2480621‑M2/8‑91 (MQ=255) gtttGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTTAGAAGGCCATTGCTCTATCCAGc < 1:2710151‑M2/87‑1 (MQ=255) tGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTTAGAAGGCCATTGCTCTATCCAGCTGa < 1:1938178‑M2/90‑1 (MQ=255) tGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTTAGAAGGCCATTGCTCTATCCAGCTGa > 2:379913‑M2/2‑91 (MQ=255) tGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTTAGAAGGCCATTGCACTATCCAGCTGa > 2:3750748‑M2/2‑91 (MQ=255) ggTAATGCGTATAAAAATACCTATAAACGTCATGGGAGGGATTCGAACCCCCGACCGATGGCTTAGAAGGCCATTGCTCTATCCAGCTGAg < 1:5239479/91‑1 (MQ=255) | CTTATGCGGGGGACGTTTTGGTGACGCATCATACTATATTACTGAAATTCAAAACAAAAAGAGCCCCGTAATCACGGAACTCTTTTGTTTGGTAATGCGTATAAAAATACCTATAAACGTCCTGGGAGGGATTCGAACCCCCGACCGATGGCTTAGAAGGCCATTGCTCTATCCAGCTGAG > USA300TCH1516_ALE/1181791‑1181971 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |