New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | USA300TCH1516_ALE | = 2541819 | 263 (0.920) | 15 (0.060) | 10/136 | NT | 5.6% | intergenic (+78/‑422) | sbi/hlgA | Immunoglobulin‑binding protein sbi/Gamma‑hemolysin component A |
? | USA300TCH1516_ALE | = 2541837 | 280 (1.150) | intergenic (+96/‑404) | sbi/hlgA | Immunoglobulin‑binding protein sbi/Gamma‑hemolysin component A |
Only 100 of 395 total aligned reads displayed.
CAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCTGCAACTTGTTAAATAATCCTTAC > USA300TCH1516_ALE/2541747‑2541927 | caaAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCt < 1:1159573/91‑1 (MQ=255) aaaTATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTacg < 2:2627797‑M2/91‑4 (MQ=255) aaaTATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTacg > 1:4582987‑M2/1‑88 (MQ=255) aaaTATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTacg < 1:3786428‑M2/91‑4 (MQ=255) aaTATCTACTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTacgg > 1:4474851‑M2/1‑87 (MQ=255) tatCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTacggtt < 1:2454363‑M2/91‑7 (MQ=255) atCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTacggttc < 2:918891‑M2/91‑8 (MQ=255) atCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTacggttc > 2:1417730‑M2/1‑84 (MQ=255) tcttctCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTacggttct < 1:4868444‑M2/91‑9 (MQ=255) cttctCTAGTTTTACGTCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTacggttctt > 2:4353906‑M2/1‑82 (MQ=255) cttctCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTacggttctt < 1:761526‑M2/91‑10 (MQ=255) tctcTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGGACCGTTGATTCTCAATCGAATCTacggttctttt < 1:1066546‑M2/91‑12 (MQ=255) tctcTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTacggttctttt < 1:5320339‑M2/91‑12 (MQ=255) tctcTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTacggttctttt > 1:2935644‑M2/1‑80 (MQ=255) ctctAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTacggttcttttt < 1:3173728‑M2/91‑13 (MQ=255) ctctAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTacggttcttttt > 2:3451396‑M2/1‑79 (MQ=255) aGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCAt < 2:203136/91‑1 (MQ=255) tttACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCAtttt < 1:1777411/91‑1 (MQ=255) aCATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCa > 2:1339547/1‑91 (MQ=255) aCATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCa > 1:4192627/1‑91 (MQ=255) catcatTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCAt > 2:3154178/1‑91 (MQ=255) catcatTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCAt > 1:2486722/1‑91 (MQ=255) catcatTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCAt < 2:2402848/91‑1 (MQ=255) catcatTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCAt > 1:3880365/1‑91 (MQ=255) atcatTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATc < 1:3459355/91‑1 (MQ=255) tcatTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCa < 2:3532280/91‑1 (MQ=255) catTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCaa > 1:2804169/1‑91 (MQ=255) atTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAAt < 1:2686388/91‑1 (MQ=255) atTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAAt < 1:3677432/91‑1 (MQ=255) aaaTAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGc < 1:5097587/91‑1 (MQ=255) aataatTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGct < 2:2112733/91‑1 (MQ=255) ataatTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGctt > 2:85212/1‑91 (MQ=255) taatTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGcttc > 2:2915059/1‑91 (MQ=255) aatTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGcttct < 2:600873/91‑1 (MQ=255) aatTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGcttct < 1:8397/91‑1 (MQ=255) tttCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCg < 2:534439/91‑1 (MQ=255) ttCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGc < 2:1750301/91‑1 (MQ=255) ttCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGc < 1:1474182/91‑1 (MQ=255) tCGTAACAATCCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCt < 1:2630773/91‑1 (MQ=255) tCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCt < 1:1036781/91‑1 (MQ=255) tCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCt < 2:297170/91‑1 (MQ=255) gTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTAt > 2:4784735/1‑91 (MQ=255) tAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTAtt > 1:3406520/1‑91 (MQ=255) tAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTAtt > 1:539764/1‑91 (MQ=255) tAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTAtt > 1:4090934/1‑91 (MQ=255) tAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTAtt < 2:4133245/91‑1 (MQ=255) aaCAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTAttt < 2:3863711/91‑1 (MQ=255) aaCAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTAttt > 2:5148768/1‑91 (MQ=255) aCAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTg > 1:1654619/1‑91 (MQ=255) aaaCCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTc < 1:2388002/91‑1 (MQ=255) aaCCGTGATTAAAAAGAACCGTTGAATCTCAATCGAATCTACGGTTCTTATTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCa < 2:5231165/91‑1 (MQ=255) gTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTacggttctttttaatcaaggtttgttacgaaaattatttaaaaaatgatgtaaaa < 2:2333510‑M2/91‑56 (MQ=255) gTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGccc < 1:2928213/91‑1 (MQ=255) gTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGccc > 1:1347758/1‑91 (MQ=255) tGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCa < 2:4015760/91‑1 (MQ=255) tGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCa < 1:4820343/91‑1 (MQ=255) aTTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACt > 1:4007986/1‑91 (MQ=255) aTTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACt < 2:1840164/91‑1 (MQ=255) aTTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATCAAATGCTTCTTCGCTATTTGTCAGCCCACt > 1:4346189/1‑91 (MQ=255) tAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACttt < 1:5195471/91‑1 (MQ=255) tAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACttt < 1:1722644/91‑1 (MQ=255) tAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACttt < 2:4242592/91‑1 (MQ=255) tAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACttt < 1:631931/91‑1 (MQ=255) aaaGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACtttttt > 1:4558909/1‑91 (MQ=255) aaaGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACtttttt < 1:182207/91‑1 (MQ=255) aaaGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACtttttt < 1:4042703/91‑1 (MQ=255) aGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTAc > 1:2042073/1‑91 (MQ=255) gAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTAcc < 2:3959317/91‑1 (MQ=255) aaCCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCt < 2:1632603/91‑1 (MQ=255) aaCCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCt > 2:3925112/1‑91 (MQ=255) aaCCGCTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCACCCCACTTTTTTACCt > 2:5532312/1‑91 (MQ=255) ccGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCTGc > 2:564640/1‑91 (MQ=255) cGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCTGCa < 2:494741/91‑1 (MQ=255) cGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCTGCa < 1:2761763/91‑1 (MQ=255) cGTTGATTCTCAAACGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCTGCa < 2:219334/91‑1 (MQ=255) gTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCTGCaa < 1:1194562/91‑1 (MQ=255) gTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCTGCaa > 2:3336501/1‑91 (MQ=255) ttGATTCTCAATCGAATCTACGGTTCTTTTTTCTTTTTTCATCAATTAAATGCTTCTTCGCTCTTTGTCATCCCACTTTTTTACCTGCAAc > 2:5037606/1‑91 (MQ=255) ttGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCTGCAAc < 2:1156388/91‑1 (MQ=255) gATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCTGCAACtt > 1:2260749/1‑91 (MQ=255) aTTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCTGCAACTTg < 1:946897/91‑1 (MQ=255) ctcAATCGAATCTacggttctttttaatcacggtttgttacgaaaattatttaaaaaatgatgtaaaactagagaagatatttttgattga < 1:2165017‑M2/91‑79 (MQ=255) tcAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCTGCAACTTGTTaa < 2:80259/91‑1 (MQ=255) cAATCGAATCTacggttctttttaatcacggtttgttacgaaaattatttaaaaaatgatgtaaaactagagaagatatttttgattgatt < 1:801104‑M2/91‑81 (MQ=255) cAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCTGCAACTTGTTaaa < 2:3050447/91‑1 (MQ=255) cAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCTGCAACTTGTTaaa < 2:4575268/91‑1 (MQ=255) aaTCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCTGCAACTTGTTAaat > 1:1570980/1‑91 (MQ=255) aaTCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCTGCAACTTGTTAaat > 1:5015380/1‑91 (MQ=255) cGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCTGCAACTTGTTAaataat > 2:3279964/1‑91 (MQ=255) cGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTGTTTACCTGCAACTTGTTAaataat < 1:5452942/91‑1 (MQ=255) gAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCTGCAACTTGTTAAATAATc > 1:2205945/1‑91 (MQ=255) aaTCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCTGCAACTTGTTAAATAATcc > 1:3529333/1‑91 (MQ=255) aaTCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCTGCAACTTGTTAAATAATcc < 1:2313759/91‑1 (MQ=255) aTCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCTGCAACTTGTTAAATAATCCt > 1:479134/1‑91 (MQ=255) tCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCTGCAACTTGTTAAATAATCCtt > 1:127938/1‑91 (MQ=255) cTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCTGCAACTTGTTAAATAATCCTTa < 2:1235407/91‑1 (MQ=255) cTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCTGCAACTTGTTAAATAATCCTTa < 1:2983047/91‑1 (MQ=255) cTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCTGCAACTTGTTAAATAATCCTTa > 2:3649600/1‑91 (MQ=255) tACGGTTCTTTTTTCATTTTTCTTCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCTGCAACTTGTTAAATAATCCTTAc > 2:4655071/1‑91 (MQ=255) tACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCTGCAACTTGTTAAATAATCCTTAc < 2:2744458/91‑1 (MQ=255) | CAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTACGGTTCTTTTTTCATTTTCCATCAATTAAATGCTTCTTCGCTATTTGTCAGCCCACTTTTTTACCTGCAACTTGTTAAATAATCCTTAC > USA300TCH1516_ALE/2541747‑2541927 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |