breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
Marginal new junction evidence (sorted from low to high skew) | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | USA300TCH1516_ALE | 2660570 = | 106 (1.170) | 3 (0.040) | 3/236 | NT | 3.0% | intergenic (+12/+237) | ldhD_1/ybiV | D‑lactate dehydrogenase/Sugar phosphatase YbiV |
? | USA300TCH1516_ALE | 2660603 = | 96 (1.170) | intergenic (+45/+204) | ldhD_1/ybiV | D‑lactate dehydrogenase/Sugar phosphatase YbiV | |||||
* | ? | USA300TCH1516_ALE | = 2085309 | 67 (0.740) | 3 (0.040) | 3/232 | NT | 4.1% | coding (186/201 nt) | hlb_1 | Phospholipase C |
? | USA300TCH1516_ALE | 2128358 = | 80 (0.990) | coding (16/825 nt) | hlb_2 | Phospholipase C | |||||
* | ? | NC_012417 | 1976 = | 1437 (0.990) | 4 (0.000) | 3/246 | NT | 0.31% | intergenic (+209/+117) | USA300HOU_RS14895/USA300HOU_RS14900 | hypothetical protein/hypothetical protein |
? | NC_012417 | 2035 = | 1183 (0.860) | intergenic (+268/+58) | USA300HOU_RS14895/USA300HOU_RS14900 | hypothetical protein/hypothetical protein | |||||
* | ? | NC_012417 | 1964 = | 1499 (1.030) | 6 (0.000) | 4/238 | NT | 0.49% | intergenic (+197/+129) | USA300HOU_RS14895/USA300HOU_RS14900 | hypothetical protein/hypothetical protein |
? | NC_012417 | 2053 = | 1089 (0.820) | intergenic (+286/+40) | USA300HOU_RS14895/USA300HOU_RS14900 | hypothetical protein/hypothetical protein |