| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012417 | = 2937 | 1321 (1.120) | 8 (0.010) | 7/286 | 68.3 | 0.64% | intergenic (‑263/–) | USA300HOU_RS14900/– | hypothetical protein/– |
| ? | NC_012417 | = 2949 | 1222 (1.070) | intergenic (‑275/–) | USA300HOU_RS14900/– | hypothetical protein/– | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 1323 total aligned reads displayed.
TATTTTTAATTTTTAATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTAT > NC_012417/2789‑3085 | ttttttaatttttaaTTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACg < 2:35169/148‑1 (MQ=255) atttttaatttttaATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACg < 1:344550/149‑1 (MQ=255) ttaatttttaatttTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAgtg > 1:61491/1‑149 (MQ=255) atttttaattttCTTAATTCGATTTTATTTGATTATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGCATAGGTTGTTTTTTGAAACGAGTG‑TGa < 2:335413/149‑1 (MQ=255) tttttaattttGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGaa > 2:511682/1‑149 (MQ=255) ttttaattttGTTAATTCGATTTTATTTGATAATCCTTTTGTATTTTTAGAATGTTTTATTTATTCATTGGGTTTTAAATTAATGTATTTAGTGTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAAc < 2:286938/149‑1 (MQ=255) tttaattttGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACg < 1:487772/149‑1 (MQ=255) ttttGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGttt < 2:104886/149‑1 (MQ=255) ttttGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGttt < 1:558034/149‑1 (MQ=255) tttGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTttc < 1:499802/149‑1 (MQ=255) ttGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTttct < 1:565874/149‑1 (MQ=255) tttAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTttcttc < 2:558155/148‑1 (MQ=255) ttAATTCGATTTTATTTGATAATCCGTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGGTGTCGGATAAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGAG‑TGAACGAGTttcttgt > 2:273085/1‑147 (MQ=255) tcaaTTCGATTTTATTTGATAATCCTTTTGATTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGATGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTtcttct < 2:25295/147‑1 (MQ=255) tAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTCTTTAGGTTTAGAGGGTCATAAACAGAAGAAGCACTAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTcttctt > 2:483953/1‑149 (MQ=255) tAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTcttctt < 1:245849/149‑1 (MQ=255) tAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTcttctt > 2:419262/1‑149 (MQ=255) ttCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTtcttgtc < 2:170934/149‑1 (MQ=255) ttCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTtcttgtc < 2:457499/149‑1 (MQ=255) ttCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTtcttgtc < 2:260400/149‑1 (MQ=255) ttgATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTtcttgtct < 2:383522/147‑1 (MQ=255) cGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTtcttgtctt < 2:32825/149‑1 (MQ=255) cGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTtcttgtctt < 1:516364/149‑1 (MQ=255) cGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTtcttgtctt < 2:547083/149‑1 (MQ=255) gATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTtcttgtcttg < 1:133794/149‑1 (MQ=255) gATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTtcttgtcttg < 1:376541/149‑1 (MQ=255) gATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTtcttgtcttg < 1:481885/149‑1 (MQ=255) aTTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGa < 1:204122/149‑1 (MQ=255) aTTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGa < 1:59536/149‑1 (MQ=255) aTTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTATTGAAACTAGTG‑TGAACGAGTTTCTTCTTGTCTTGa < 1:387686/149‑1 (MQ=255) ttttATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAACAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGAt < 1:19728/149‑1 (MQ=255) tttattttatAATCCTTTTGCCTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATa < 1:280851/149‑1 (MQ=255) tttATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACTAGTG‑TGAACGAGTTTCTTCTTGTCTTGATa < 2:437210/149‑1 (MQ=255) tttATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATa < 2:21236/149‑1 (MQ=255) tttATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATa < 1:183978/149‑1 (MQ=255) tttATTTGACAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATa < 1:153859/149‑1 (MQ=255) ttttttGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATAc < 1:44163/146‑1 (MQ=255) ttATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATAc < 2:430185/149‑1 (MQ=255) ttATTTGATAATCCTTTTGACTTTGTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATAc < 1:587957/149‑1 (MQ=255) tATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACt < 1:109287/149‑1 (MQ=255) tATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACt < 2:445946/149‑1 (MQ=255) tATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTACACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACt < 1:100712/149‑1 (MQ=255) tATTTGATAATACTTTTTACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACt < 2:536504/149‑1 (MQ=255) ttttGATAATTCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTATAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACta < 2:570884/148‑1 (MQ=255) aTTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACta < 2:499849/149‑1 (MQ=255) tttGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACtat < 1:298653/149‑1 (MQ=255) ccTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATa > 2:369635/1‑149 (MQ=255) ttttGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAAc > 1:29165/1‑149 (MQ=255) tttGACGTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTTTTGTCTTGATACTATATAGAAATAACt < 1:357651/149‑1 (MQ=255) ttttttAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTCTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGAtt < 2:528614/148‑1 (MQ=255) cTTTTTTGAAAGTTTTATTTATTCATTGGTTTTCCTATTAATTTATTTGGGTTTAGAGGGTCATAAATAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATGTAGAAATAATTCGAtt < 2:406504/149‑1 (MQ=38) cTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGAtt < 1:27141/149‑1 (MQ=255) ttttAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGAtttt > 1:57738/1‑149 (MQ=255) ttAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGTTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTtat < 1:165855/149‑1 (MQ=255) ttAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTtat < 1:74374/149‑1 (MQ=255) aaaaGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTtatata < 1:32593/148‑1 (MQ=255) aaGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGCCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACAAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTtatatata > 1:406522/1‑149 (MQ=255) aGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATCCTATATAGAAATAACTCGATTTtatatatat < 1:144074/149‑1 (MQ=255) tttttATTTATTCATTGGTTTTCATATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTtatatatata < 1:367491/148‑1 (MQ=255) gTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTTTTTTTTTTGTTTAGCAAATTTC‑TCTTTTCGTGATACTATATAGAAATAACTCGATTTtatatatatt > 2:576441/1‑148 (MQ=255) cATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTTATACGATTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAAATCGATTTTATATTTATAGTTGTAACTGtt > 2:474797/1‑149 (MQ=255) gTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATTTATAGCTGTAACTGTTGatat > 2:199770/1‑149 (MQ=255) ttttCACATTAATTTATTTAGGATTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCGCTTCGCCAAATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATAtt > 1:312696/1‑149 (MQ=38) tCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACa > 2:158490/1‑149 (MQ=255) cacaTTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAg < 2:220141/149‑1 (MQ=255) cacaTTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAAAGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGAACTTACAg > 2:14899/1‑149 (MQ=255) acaTTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAgt < 1:118280/149‑1 (MQ=255) ttaGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACgtgt > 1:92402/1‑149 (MQ=255) ttaGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACgtgt > 1:537001/1‑149 (MQ=255) ttggTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTTTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGtt < 2:127958/147‑1 (MQ=255) tttAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTtg > 1:429363/1‑149 (MQ=255) gagGGTCATAAATAGAAGGAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCg < 1:523826/149‑1 (MQ=255) gagGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCg > 2:191816/1‑149 (MQ=255) cATAAAAAGAAGAAGGAATAGGTTGTTTTTTGACACGAGTG‑AGAACGAGGTTCGGCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAg > 1:415873/1‑149 (MQ=255) cATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAATGTGTG‑TGAACGCGTTTCTTCTTGTCTTCGTACTATATAGAAATAACTCGATTTTATATCTATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGttcaag > 2:60732/1‑144 (MQ=255) cATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATCCTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTTCGTGAAAg > 2:231854/1‑149 (MQ=255) aagaagaagGAATAGGTTGTTTTTTTTTTTTTTTT‑TGAACGAGTTTCTTCTTGTCTTGATACTATTTATAAATAGCTTTCTTTTATTTATATTTCTGTTACTGTTGATATTACAGTGATTAAACGTGTTTTTGTGTGTGAAAGGAAAAt > 2:361150/1‑149 (MQ=255) agaagaagGATAAGGTTGTTTTTAGCAACGAGTG‑TGAACGAGTTTCTTCTTGTTTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAAtt < 2:242929/149‑1 (MQ=255) gaagaagGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAAttt > 1:178967/1‑149 (MQ=255) aagaagGAATTGGTTGTTTTTCGAAACGAGTG‑TGAACGAGTTTCTTCTTGGTTTGATACTATACATAAATAACTCGATTTTATATATATAGCTGTTCCTGTTGACATTCCAGTGTTTAAACGTGTCATTGTGCTTGAAAGGAAAATTTg < 2:136884/149‑1 (MQ=255) aagaagGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGCGAAAGCCAAAtatt > 2:114066/1‑146 (MQ=255) aagaagGAATAGGTTGTTTTTTGAAACGAGCT‑TGAACGAGTTTCTTCTTTTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTCAAGTTGTTGTTGTGCGTGAAAGGAAAATTTg < 2:67940/149‑1 (MQ=255) agaagGAATAGGTTGTGTTTTGAAACGAGGG‑TGAACGAGTTTCTTCTTTTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGa < 2:75006/149‑1 (MQ=255) gaagGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGAc < 2:8580/149‑1 (MQ=255) aagGAATAGGTTGTTTTTTGAAACGAGTG‑TAAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGATTTTGTGCGTGAAAGGAAAGTTTTACa > 1:26035/1‑149 (MQ=255) ggAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAAt < 2:469124/149‑1 (MQ=255) aGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATaaaaa < 1:66651/149‑1 (MQ=255) ggTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATaaaaaa < 1:335926/149‑1 (MQ=255) gttgttTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAAc < 1:452423/149‑1 (MQ=255) gttgttTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAAc < 1:234167/149‑1 (MQ=255) ttgttTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAAcc > 1:473907/1‑149 (MQ=255) ttgttTTTTGAAACGAGTG‑TGAACGAGTCTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGGAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAAcc < 1:213738/149‑1 (MQ=255) tgttTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAAccc > 1:546913/1‑149 (MQ=255) tgttTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACGCGATTTTATATATATAGCTGTACCTGTTGATATTACAGTGTGTAAACATGTTTTTATGAGTGAAAGGGAAATGTGACAATaaagatcgc > 2:312646/1‑143 (MQ=37) ttGAAACGAGTG‑TGAACGGGTTTCTTCTTGTCTTGATACTATATAGAAATCACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTta > 2:39801/1‑149 (MQ=255) ttGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTta > 2:296168/1‑149 (MQ=255) acaCGAGTG‑TGAACGAGTTTCTTCTTGTTTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTatat < 1:85113/147‑1 (MQ=255) aaaCGAGTG‑TAAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTatat < 1:397824/149‑1 (MQ=255) aCGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTAtatta < 1:224718/149‑1 (MQ=255) cGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTAtattat > 2:588592/1‑149 (MQ=255) | TATTTTTAATTTTTAATTTTGTTAATTCGATTTTATTTGATAATCCTTTTGACTTTTTAGAAAGTTTTATTTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTG‑TGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTAT > NC_012417/2789‑3085 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |