Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | USA300TCH1516_ALE | 1171580 | 1171700 | 121 | 2 [1] | [1] 2 | hly/USA300HOU_RS05830 | Alpha‑hemolysin/hypothetical protein |
TTATTTTAAGAATATGTTTTTAACTTTTATTTAAAATTTGAAAGGAAGCATTTCAATTTCGAGGGTTAGTCAAAGTTGAATAAATTCTTTATGAAACAAGGAAAAGACATAGCTAATTTTATTGATTAATTTCTTTAAAACTAATGATTTGTTTGATTTAAAAATGTAATCGATTACAATAT > USA300TCH1516_ALE/1171429‑1171610 | ttattTTAAGGATATGTTTTTAACTTTTATTTAAAATTTGAAAGGAAGCATTTCAATTTCGAGGGTTATTCAAAGTTGATTAAATTCTTTATGAAACAAGGAAAAGACATAGCTAATTTTATTGATTAATTTCTTTAAAACTAATGAtttg < 2:523376/151‑1 (MQ=255) taAAATTTGAAAGGAAGCATTTCAATTTCGAGGGTTAGTCAAAGTTGAATAAATTCTTTATGAAACAAGGAAAAGACATAGCTAATTTTATTGATTAATTTCTTTAAAACTAATGATTTGTTTGATTTAAAAATGTAATCGATTACAatat < 1:179319/151‑1 (MQ=255) | TTATTTTAAGAATATGTTTTTAACTTTTATTTAAAATTTGAAAGGAAGCATTTCAATTTCGAGGGTTAGTCAAAGTTGAATAAATTCTTTATGAAACAAGGAAAAGACATAGCTAATTTTATTGATTAATTTCTTTAAAACTAATGATTTGTTTGATTTAAAAATGTAATCGATTACAATAT > USA300TCH1516_ALE/1171429‑1171610 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |