| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP000730 | 2,430,685 | Δ1 bp | 5.8% | intergenic (‑109/‑276) | suhB ← / → USA300HOU_2294 | inositol‑phosphate phosphatase/transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 2,430,685 | 0 | T | . | 5.8% | 442.7 / 21.5 | 138 | intergenic (‑109/‑276) | suhB/USA300HOU_2294 | inositol‑phosphate phosphatase/transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (67/61); new base . (3/5); total (71/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.84e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.90e-01 | |||||||||||
Only 100 of 138 total aligned reads displayed.
TCTATTTGCTGTAATGTTTTATCTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTTATATAGCTCTACCCCTTTGTTTAATCGCTCCCCCTGTTACAAGTAATAT > CP000730/2430548‑2430822 | tCTATTTGCTGTAATGTTTTATCTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTACAAGAATAAACACTACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCAc < 2:1402587/141‑1 (MQ=255)tCTATTTGCTGTAATGTTTTATCTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCAc < 1:1586486/141‑1 (MQ=255) tATTTGCTGTAATGTTTTATCTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGt < 1:967613/141‑1 (MQ=255) tATTTGCTGTAATGTTTTATCTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAG‑CACGTg < 2:1235696/141‑1 (MQ=255) tATTTGCTGTAATGTTTTATCTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAG‑CACGTg < 1:1244857/141‑1 (MQ=255) tGCTGTAATGTTTTATCTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACTGGACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTa > 1:104584/1‑141 (MQ=255) tGCTGTAATGTTTTATCTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTa > 1:1364585/1‑141 (MQ=255) tcTGTACTTTTTTACCTGTCATTTCATTCACCACTTCTCATATCATTATCCTTTTATTATTTCCATATATTAAAAGAATAATCAATACAACTGAAGACTTCTTCATTTTATGCATAAAAATATCGGCCAGTCACGTG‑CCAg < 2:491616/140‑1 (MQ=255) gCTGTAATGTTTTATCTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAg < 2:330327/141‑1 (MQ=255) cTGTAATGTTTTATCTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGc < 1:939789/141‑1 (MQ=255) tGTAATGTTTTATCTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGcc < 2:1195385/141‑1 (MQ=255) gTAATGTTTTATCTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCg > 2:359041/1‑141 (MQ=255) gTAATGTTTTATCTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCg < 1:973052/141‑1 (MQ=255) gTAATGTTTTATCTGTCATTTAGTCGAATACTTTGCGAATTATTATTTTGGTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAG‑CACGTGACTAGCCg > 2:494030/1‑141 (MQ=255) tAATGTTTTATCTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAG‑CACGTGACTAGCCGa < 1:1586165/141‑1 (MQ=255) aTGTTTTATCTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACa < 1:1040195/141‑1 (MQ=255) aTGTTTTATCTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACa > 1:288363/1‑141 (MQ=255) aTGTTTTATCTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATATAAAAAAAAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACa < 2:178276/141‑1 (MQ=255) ttttATCTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAAt < 1:654959/141‑1 (MQ=255) ttttATCTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAAt > 2:927178/1‑141 (MQ=255) ttttATCTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAAt > 2:2316/1‑141 (MQ=255) aTCTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACGCGATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACTTT‑CTAGCCGACTAATAgaa > 2:576512/1‑141 (MQ=255) aTCTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAgaa > 1:430302/1‑141 (MQ=255) aTCTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAgaa > 1:18359/1‑141 (MQ=255) aTCTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTCCATTTTATACATAAAAAAATCGGCTAATTAAGTG‑CTAGTCGAAAAATaaaa > 2:744545/1‑141 (MQ=255) tCTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAgaaa > 2:215235/1‑141 (MQ=255) tCTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAgaaa < 1:361355/141‑1 (MQ=255) cTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAgaaag > 1:690859/1‑141 (MQ=255) cTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAgaaag < 2:27803/141‑1 (MQ=255) tGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAG‑CACGTGACTAGCCGatttttttatgca < 1:1474789/141‑13 (MQ=38) tCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAgaaaggaa > 2:741852/1‑141 (MQ=255) aTTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAgaaaggaaag < 2:1014163/141‑1 (MQ=255) tCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAaagtaa < 1:1018426/141‑1 (MQ=255) cGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGNG‑CTAGCCGACAANTAGAAAGGAaagtaag < 1:966855/141‑1 (MQ=255) ccaccaCTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAgaaactattgctcatca > 1:983313/1‑128 (MQ=255) caccacTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGtaat < 1:1295322/141‑1 (MQ=255) accacTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGtaata > 2:409238/1‑141 (MQ=255) cTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTaataaata < 1:1366431/141‑1 (MQ=255) cTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAAGCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTaataaata < 1:16088/141‑1 (MQ=255) tctcATATCATTATCATTTTATTATTATCATTTAGTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATAtt > 2:495046/1‑141 (MQ=255) tctcATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATAtt < 1:899439/141‑1 (MQ=255) ctcATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTg > 1:1391977/1‑141 (MQ=255) tcATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGa > 1:397439/1‑141 (MQ=255) cATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAaagtaagt > 2:1234347/1‑128 (MQ=255) cATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAaagtaagt < 1:1234347/128‑1 (MQ=255) cATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGaa > 1:525599/1‑141 (MQ=255) atatCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAg > 2:544793/1‑141 (MQ=255) attatcattTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGAtgtt < 1:507623/141‑1 (MQ=255) tatcattTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGAtgttgt < 1:205895/141‑1 (MQ=255) ttttATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGt < 1:86953/141‑1 (MQ=255) ttttATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGt < 1:1296612/141‑1 (MQ=255) ttttATTATTACCCTATATTAAAAGAATCAACAATACAACTGAACACTTCTTCATTTTATTCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGt < 2:720321/141‑1 (MQ=255) ttattattaCCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTaa > 2:1342140/1‑141 (MQ=255) tattattaCCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAAc < 2:591475/141‑1 (MQ=255) attaCCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGa > 1:72705/1‑141 (MQ=255) ttaCCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGaa < 2:1124035/141‑1 (MQ=255) taCCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTACGTAATAAATATTGAAGATGTTGTGATGTAACATGAAc > 2:1334895/1‑141 (MQ=255) taCCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAAc > 2:148251/1‑141 (MQ=255) taCCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAAc > 2:892764/1‑141 (MQ=255) taCCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAAc < 2:1603301/141‑1 (MQ=255) ccTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGAt < 1:687041/141‑1 (MQ=255) atatTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTaa < 2:1164372/141‑1 (MQ=255) atatTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTaa > 1:393653/1‑141 (MQ=255) atatTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTaa > 1:363875/1‑141 (MQ=255) ttAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAg > 1:1593897/1‑141 (MQ=255) tAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGc < 2:929509/141‑1 (MQ=255) aaaGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTa > 1:1654171/1‑141 (MQ=255) aTCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCAAGTCACGTG‑CTAGTCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGt > 2:1654192/1‑141 (MQ=255) caacaaTACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTta < 2:1358958/141‑1 (MQ=255) caacaaTACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTta > 1:110807/1‑141 (MQ=255) caacaaTACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTta > 1:1404863/1‑141 (MQ=255) acaaTACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTtata > 1:891684/1‑141 (MQ=255) acaaTACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTtata > 2:143765/1‑141 (MQ=255) cAACTGAAGACTTCTTCATTTTATGCCTAAAAAAATCGGCTAGACCCGTG‑AAAGACGCCAACTAAATAGTATACATAGTAATAAATCTTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTTATATAGctc < 1:576512/141‑1 (MQ=255) aCTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTTATATAGCTCTa < 2:1349599/141‑1 (MQ=255) aaGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTTATATAGCTCTAcccc < 2:575057/141‑1 (MQ=255) cttcttcttTTTATGCATAAAACATTCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGTAAAGTATGTAATAAATATTGAAGATGTTGTGCTGTAACTTTAACGATTAAAAGCTATATGTTATATAGCTCTACCGCTTTg > 2:835104/1‑141 (MQ=255) cttcttCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTTATATAGCTCTACCCCTTTg > 1:1548878/1‑141 (MQ=255) cttcttCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTTATATAGCTCTACCCCTTTg < 2:470018/141‑1 (MQ=255) tcttcATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTTATATAGCTCTACCCCTTTGtt < 1:1642454/141‑1 (MQ=255) ttttATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTTATATAGCTCTACCCCTTTGTTTAATCg < 1:187249/141‑1 (MQ=255) tttATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTTATATAGCTCTACCCCTTTGTTTAATCGc < 2:525599/141‑1 (MQ=255) aTGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTTATATAGCTCTACCCCTTTGTTTAATCGCTcc > 2:432658/1‑141 (MQ=255) tGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTTATATAGCTCTACCCCTTTGTTTAATCGCTccc > 1:579481/1‑141 (MQ=255) cATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTTATATAGCTCTACCCCTTTGTTTAATCGCTccccc > 2:501851/1‑141 (MQ=255) tAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTTATATAGCTCTACCCCTTTGTTTAATCGCTCCCCCTg > 2:174092/1‑141 (MQ=255) tAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTTATATAGCTCTACCCCTTTGTTTAATCGCTCCCCCTg > 2:1277911/1‑141 (MQ=255) aaaaaaaTCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTTATATAGCTCTACCCCTTTGTTTAATCGCTCCCCCTGt < 1:1266677/141‑1 (MQ=255) tatttgtCGGCTAG‑CACGTGACTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCCGTTATATAGCTCTACCCCTTTGTTTAATCGCTCCCCCTGtt > 2:1272693/7‑141 (MQ=255) aaaaaaTCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTTATATAGCTCTACCCCTTTGTTTAATCGCTCCCCCTGtt > 1:1453523/1‑141 (MQ=255) aaaaaaTCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTTATATAGCTCTACCCCTTTGTTTAATCGCTCCCCCTGtt > 1:368215/1‑141 (MQ=255) aaaaTCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTTATATAGCTCTACCCCTTTGTTTAATCGCTCCCCCTGTTAc < 2:306290/141‑1 (MQ=255) aaaTCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGACAAATCCAAAGATATCTGTTATATTGATCTACCACTTTGTTCAATCGCTCCCACTGTTACa > 1:150943/1‑141 (MQ=255) aTCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTTATATAGCTCTACCCCTTTGTTTAATCGCTCCCCCTGTTACAAg > 2:1357906/1‑141 (MQ=255) aTCGGCTAGTCACGTG‑CTAGCCGACAAACAGAAAGAAAAGTAAGTAATAAATATTTAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTTATATAGCTCTACCCCTTTGTTTAATCGCTCCCCCTGTTACAAg < 1:1306828/141‑1 (MQ=255) tCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTTATATAGCTCTACCCCTTTGTTTAATCGCTCCCCCTGTTACAAGt < 1:892764/141‑1 (MQ=255) tCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTTATATAGCTCTACCCCTTTGTTTAATCGCTCCCCCTGTTACAAGt > 2:1611456/1‑141 (MQ=255) tCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTTATATAGCTCTACCCCTTTGTTTAATCGCTCCCCCTGTTACAAGt < 1:1187689/141‑1 (MQ=255) cGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTTATATAGCTCTACCCCTTTGTTTAATCGCTCCCCCTGTTACAAGTa < 1:820745/141‑1 (MQ=255) gCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTTATATAGCTCTACCCCTTTGTTTAATCGCTCCCCCTGTTACAAGTAat > 2:791975/1‑141 (MQ=255) | TCTATTTGCTGTAATGTTTTATCTGTCATTTCGTCCACCACTTCTCATATCATTATCATTTTATTATTACCCTATATTAAAAGAATCAACAATACAACTGAAGACTTCTTCATTTTATGCATAAAAAAATCGGCTAGTCACGTG‑CTAGCCGACAAATAGAAAGGAAAGTAAGTAATAAATATTGAAGATGTTGTGATGTAACTTGAACGATTAAAAGCTATCTGTTATATAGCTCTACCCCTTTGTTTAATCGCTCCCCCTGTTACAAGTAATAT > CP000730/2430548‑2430822 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |