BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 2062972	92 (0.710)	12 (0.100)	8/226	NT	13.1%	intergenic (+53/+137)	pheA/sdcS	prephenate dehydratase/DASS family divalent anion:sodium (Na+) symporter
*	?	CP000730	= 2062986	78 (0.680)	12 (0.100)	8/226	NT	13.1%	intergenic (+67/+123)	pheA/sdcS	prephenate dehydratase/DASS family divalent anion:sodium (Na+) symporter

Only 100 of 150 total aligned reads displayed.

TTCTGCAATTACAACCGATATAAAGAAAGTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGATGCTGCGGTATACGTTTCGTTACCACTCGTCCAAGCAATTGCTAATGTAACCTTTTATTTTTCGTTCTAATCTGCAATTACTAT  >  CP000730/2062832‑2063112

ttCTGCAATTACAACCGATATAAAGAAAGTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGAT                                                                                                                                              >  1:1487087‑M1/1‑141 (MQ=255)

  cTGCAATTACAACCGATATAAAGAAAGTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTa                                                                                                                                            >  1:308131/1‑141 (MQ=255)

       aTTACAACCGATATAAAGAAAGTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATa                                                                                                                                       <  2:719499/141‑1 (MQ=255)

        ttACAACCGATATAAAGAAAGTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAg                                                                                                                                      <  1:681972/141‑1 (MQ=255)

          aCAACCGATATAAAGAAAGTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTTTTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGa                                                                                                                                    >  1:710344/1‑141 (MQ=255)

          aCAACCGATATAAAGAAAGTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGa                                                                                                                                    >  2:460069/1‑141 (MQ=255)

           cAACCGATATAAAGAAAGTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGaa                                                                                                                                   <  1:264509/141‑1 (MQ=255)

           cAACCGATATAAAGAAAGTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGaa                                                                                                                                   <  1:53020/141‑1 (MQ=255)

            aaCCGATATAAAGAAAGTCATTGCTATTTTGGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAat                                                                                                                                  <  2:1511430/141‑1 (MQ=255)

            aaCCGATATAAAGAAAGTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAat                                                                                                                                  >  1:1187182/1‑141 (MQ=255)

             aCCGATATAAAGAAAGTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATggattcctatttt                                                                                                                                 <  1:255067‑M1/141‑14 (MQ=255)

             aCCGATATAAAGAAAGTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAatc                                                                                                                                 <  1:884905/141‑1 (MQ=255)

             aCCGATATAAAGAAAGTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAatc                                                                                                                                 >  1:164445/1‑141 (MQ=255)

             aCCGATATAAAGAAAGTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAatc                                                                                                                                 >  1:526671/1‑141 (MQ=255)

             aCCGATATAAAGAAAGTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAatc                                                                                                                                 <  2:1461825/141‑1 (MQ=255)

              ccGATATAAAGAAAGTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCACGGCTTAAAATAGGAatcc                                                                                                                                <  2:758909/141‑1 (MQ=255)

               cGATATAAAGAAAGTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATggattcctattttaa                                                                                                                               <  2:508341‑M1/141‑16 (MQ=255)

               cGATATAAAGAAAGTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATggattcctattttaa                                                                                                                               <  1:192876‑M1/141‑16 (MQ=255)

               cGATATAAAGAAAGTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATggattcctattttaa                                                                                                                               <  2:650164‑M1/141‑16 (MQ=255)

               cGATATAAAGAAAGTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATggattcctattttaa                                                                                                                               <  2:309135‑M1/141‑16 (MQ=255)

               cGATATAAAGAAAGTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCa                                                                                                                               >  1:684598‑M2/1‑140 (MQ=255)

                   ataAAGAAAGTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCatcct                                                                                                                           <  2:1069367‑M2/141‑6 (MQ=255)

                   ataAAGAAAGTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGCCAACCAAGGATTAAAATAGGAATCCatcct                                                                                                                           <  1:1038316‑M2/141‑6 (MQ=255)

                    taAAGAAAGTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATggattcctattttaatcctt                                                                                                                          <  2:613939‑M1/141‑21 (MQ=255)

                     aaagaaagTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATggattcctattttaatccttg                                                                                                                         <  2:380301‑M1/141‑22 (MQ=255)

                     aaagaaagTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCatccttg                                                                                                                         <  1:1016692‑M2/141‑8 (MQ=255)

                       agaaagTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCatccttggt                                                                                                                       >  2:968575‑M2/1‑132 (MQ=255)

                        gaaagTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCatccttggtt                                                                                                                      >  1:969342‑M2/1‑131 (MQ=255)

                          aagTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCatccttggttga                                                                                                                    >  1:1344181‑M2/1‑129 (MQ=255)

                           agTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCatccttggttgac                                                                                                                   <  1:448464‑M2/141‑14 (MQ=255)

                             tCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATggattcctattttaatccttggttgactc                                                                                                                 <  2:852791‑M1/141‑30 (MQ=255)

                             tCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGActt                                                                                                                 <  2:586468/141‑1 (MQ=255)

                              cATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGActtt                                                                                                                <  2:1467914/141‑1 (MQ=255)

                              cATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGActtt                                                                                                                <  1:775934/141‑1 (MQ=255)

                               aTTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGActttc                                                                                                               >  1:1638912/1‑141 (MQ=255)

                               aTTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGActttc                                                                                                               >  1:283775/1‑141 (MQ=255)

                                 tGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGActttctt                                                                                                             >  1:649668/1‑141 (MQ=255)

                                  gCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGActttcttt                                                                                                            <  2:308131/141‑1 (MQ=255)

                                     aTTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTtttgt                                                                                                         >  2:167773/1‑141 (MQ=255)

                                      ttttAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATggattcctattttaatccttggttgactctttatttt                                                                                                         <  1:94662‑M1/140‑38 (MQ=255)

                                      ttttAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATggattcctattttaatccttggttgactctttatttt                                                                                                         >  2:94662‑M1/1‑103 (MQ=255)

                                       tttAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTtttgttt                                                                                                       <  1:129154/141‑1 (MQ=255)

                                        ttAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTtttgtttg                                                                                                      >  1:706961/1‑141 (MQ=255)

                                        ttAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTtttgtttg                                                                                                      <  2:706961/141‑1 (MQ=255)

                                             aaCCTTATATTTCAAAGTAGAAATGATTGGTTCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTCAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTg                                                                                                 <  1:644725/141‑1 (MQ=255)

                                             aaCCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTg                                                                                                 <  2:1197685/141‑1 (MQ=255)

                                             aaCCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTg                                                                                                 >  2:1018694/1‑141 (MQ=255)

                                              aCCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGt                                                                                                >  1:1413688/1‑141 (MQ=255)

                                                cTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGttt                                                                                              >  1:8793/1‑141 (MQ=255)

                                                cTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGttt                                                                                              <  2:1286086/141‑1 (MQ=255)

                                                 ttAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGtttt                                                                                             >  1:425122/1‑141 (MQ=255)

                                                       ttCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACg                                                                                       <  1:228261/141‑1 (MQ=255)

                                                         cAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGAt                                                                                     <  2:215997/141‑1 (MQ=255)

                                                         cAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGAt                                                                                     <  1:224081/141‑1 (MQ=255)

                                                          aaaGCAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTCTCTCTTGTTTGTATTGTCTTTACACgctc                                                                                    >  2:1543810/1‑138 (MQ=255)

                                                            aGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGAtgct                                                                                  >  1:604914/1‑141 (MQ=255)

                                                              tAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGAtgctgc                                                                                <  1:944745/141‑1 (MQ=255)

                                                                   aTGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGATGCTGCGGtat                                                                           >  2:232449/1‑141 (MQ=255)

                                                                   aTGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGATGCTGCGGtat                                                                           >  2:144660/1‑141 (MQ=255)

                                                                      aTTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGATGCTGCGGTATACg                                                                        <  1:9039/141‑1 (MQ=255)

                                                                        tGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGATGCTGCGGTATACGtt                                                                      <  1:38177/141‑1 (MQ=255)

                                                                        tGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGATGCTGCGGTATACGtt                                                                      <  2:648/141‑1 (MQ=255)

                                                                                 taattaaACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGATGCTGCGGTATACGTTTCGTTACCa                                                             >  1:1244525/1‑141 (MQ=255)

                                                                                 taattaaACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGATGCTGCGGTATACGTTTCGTTACCa                                                             >  2:350646/1‑141 (MQ=255)

                                                                                         cTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGATGCTGCGGTATACGTTTCGTTACCACTCGTCCa                                                     <  2:338707/141‑1 (MQ=255)

                                                                                            tATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGATGCTGCGGTATACGTTTCGTTACCACTCGTCCAAGc                                                  <  2:1558557/141‑1 (MQ=255)

                                                                                             aTTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGATGCTGCGGTATACGTTTCGTTACCACTCGTCCAAGCa                                                 >  1:586538/1‑141 (MQ=255)

                                                                                              ttttCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGATGCTGCGGTATACGTTTCGTTACCACTCGTCCAAGCaa                                                <  2:481228/141‑1 (MQ=255)

                                                                                                  cTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGATGCTGCGGTATACGTTTCGTTACCACTCGTCCAAGCAATTGc                                            <  1:872484/141‑1 (MQ=255)

                                                                                                   tAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGATGCTGCGGTATACGTTTCGTTACCACTCGTCCAAGCAATTGCt                                           >  2:788131/1‑141 (MQ=255)

                                                                                                   tAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATAAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGATGCTGCGGTATACGTTTCGTTACCACTCGTCCAAGCAATTGCt                                           >  1:1424192/1‑141 (MQ=255)

                                                                                                    aGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGATGCTGCGGTATACGTTTCGTTACCACTCGTCCAAGCAATTGcag                                          >  1:836300/1‑139 (MQ=255)

                                                                                                         cTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCatccttggttgactttcttttgtttaaattgtagaacctagaaaataaagtttaattaaaagcaccaatcatttctactttgaaatctaag                                     <  1:897785‑M2/141‑92 (MQ=255)

                                                                                                             aaTTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGATGCTGCGGTATACGTTTCGTTACCACTCGTCCAAGCAATTGCTAATGTAACCt                                 <  2:545251/141‑1 (MQ=255)

                                                                                                              aTTTAAGTAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGATGCTGCGGTATACGTTTCGTTACCACTCGTCCAAGCAATTGCTAATGTAACCtt                                <  1:1238908/141‑1 (MQ=255)

                                                                                                                ttAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGATGCTGCGGCATACGTTTCGTTACCACTCGTCCAAGCAATTGCTAATGTAACCtttt                              <  1:9941/141‑1 (MQ=255)

                                                                                                                              gagTCAACCAAGGATTAAAATAGGAATCCatccttggttgactctttattttatttaaattgtagaacctagaaaataaagtttaattaaaagcaccaatcatttctactttgaaatctaaggtttctaaaatagcaatga                <  2:852791‑M2/141‑113 (MQ=255)

                                                                                                                              gagTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGATGCTGCGGTATACGTTTCGTTACCACTCGTCCAAGCAATTGCTAATGTAACCTTTTATTTTTCGTTCTaa                >  1:1069067/1‑141 (MQ=255)

                                                                                                                              gagTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGATGCTGCGGTATACGTTTCGTTACCACTCGTCCAAGCAATTGCTAATGTAACCTTTTATTTTTCGTTCTaa                >  1:1069126/1‑141 (MQ=255)

                                                                                                                                gTCAACCAAGGATggattcctattttaatccttggttgactctttattttatttaaattgtagaacctagaaaataaagtttaattaaaagcaccaatcatttctactttgaaatctaaggtttctaaaatagcaatgact              <  1:448464‑M1/141‑129 (MQ=255)

                                                                                                                                 tCAACCAAGGATggattcctattttaatccttggttgactctttattttatttaaattgtagaacctagaaaataaagtttaattaaaagcaccaatcatttctactttgaaatctaaggtttctaaaatagcaatgactt             <  2:611489‑M1/141‑130 (MQ=255)

                                                                                                                                 tCAACCAAGGATggattcctattttaatccttggttgactctttattttatttaaattgtagaacctagaaaataaagtttaattaaaagcaccaatcatttctactttgaaatctaaggtttctaaaatagcaatgactt             >  1:1344181‑M1/1‑12 (MQ=255)

                                                                                                                                 tCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGATGCTGCGGTATACGTTTCGTTCTCATTAGTCATTGCGCTTGCCAATGTCATCTTTTATTTCTTGTTCTATTCt             >  1:751660/1‑141 (MQ=255)

                                                                                                                                 tCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGATGCTGCGGTATACGTTTCGTTACCACTCGTCCAAGCAATTGCTAATGTAACCTTTTATTTTTCGTTCTAATCt             <  1:1308454/141‑1 (MQ=255)

                                                                                                                                  cAACCAAGGATTAAAATAGGAATCCATCATTGGTTGACTTTCATTTGTTCGTATTGTTTTTACACGATGCTGCGGTATACGTTTCGTTACCACTCGTCCACGGAGTTGCTACTGTAACCTTTTACTTGTGGTTCTAAtttc            >  2:926621/1‑138 (MQ=255)

                                                                                                                                   aaCCAAGGATggattcctattttaatccttggttgactctttattttatttaaattgtagaacctagaaaataaagtttaattaaaagcaccaatcatttctactttgaaatctaaggtttctaaaatagcaatgactttc           >  1:969342‑M1/1‑10 (MQ=255)

                                                                                                                                   aaCCAAGGATggattcctattttaatccttggttgactctttattttatttaaattgtagaacctagaaaataaagtttaattaaaagcaccaatcatttctactttgaaatctaaggtttctaaaatagcaatgactttc           <  1:1207854‑M1/141‑132 (MQ=255)

                                                                                                                                   aaCCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGATGCTGCGGTATACGTTTCGTTACCACTCGTCCAAGCAATTGCTAATGTAACCTTTTATTTTTCGTTCTAATCTGc           <  2:1413688/141‑1 (MQ=255)

                                                                                                                                   aaCCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGNTTTTACACGATGCTGCGGTATACGTTTCGTTACCTCTCGTCCAAGCAATTGCTAANGTANCCTTTTATNTTTCGTTCTAATCTGc           <  1:1507879/141‑1 (MQ=255)

                                                                                                                                    aCCAAGGATggattcctattttaatccttggttgactctttattttatttaaattgtagaacctagaaaataaagtttaattaaaagcaccaatcatttctactttgaaatctaaggtttctaaaatagcaatgactttct          >  2:968575‑M1/1‑9 (MQ=255)

                                                                                                                                    aCCAACGATggattcctattttaatccttggttgactctttattttatttaaattgtagaacctagaaaataaagtttaattaaaagcaccaatcaattctactttgaaatctaaggtttctaaaatagcaatgactttct          <  2:205067‑M1/141‑133 (MQ=255)

                                                                                                                                      cAAGGATggattcctattttaatccttggttgactctttattttatttaaattgtagaacctagaaaataaagtttaattaaaagcaccaatcatttctactttgaaatctaaggtttctaaaatagcaatgactttcttt        <  1:1016692‑M1/141‑135 (MQ=255)

                                                                                                                                       aaGGATggattcctattttaatccttggttgactctttattttatttaaattgtagaacctagaaaataaagtttaattaaaagcaccaatcatttctactttgaaatctaaggtttctaaaatagcaatgactttcttta       <  1:1640288‑M1/141‑136 (MQ=255)

                                                                                                                                       aaGGATTAAAATAGGAATCCatccttggttgactctttattttatttaaattgtagaacctagaaaataaagtttaattaaaagcaccaatcatttctactttgaaatctaaggtttctaaaatagcaatgactttcttta       <  2:613939‑M2/141‑122 (MQ=255)

                                                                                                                                        aGGATggattcctattttaatccttggttggctctttattttatttaaattgtagaacctagaaaataaagtttaattaaaagcaccaatcatttctactttgaaatctaaggtttctaaaatagcaatgactttctttat      <  1:1038316‑M1/141‑137 (MQ=255)

                                                                                                                                        aGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGATGCTGCGGTATACGTTTCGTTACCACTCGTCCAAGCAATTGCTAATGTAACCTTTTATTTTTCGTTCTAATCTGCAATTa      <  2:1525084/141‑1 (MQ=255)

                                                                                                                                         ggATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGATGCTGCGGTATACGTTTCGTTACCACTCGTCCAAGCAATTGCTAATGTAACCTTTTATTTTTCGTTCTAATCTGCAATTAc     <  1:636482/141‑1 (MQ=255)

                                                                                                                                          gatggattcctattttaatccttggttgactctttattttatttaaattgtagaacctagaaaataaagtttaattaaaagcaccaatcatttctactttgaaatctaaggtttctaaaatagcaatgactttctttatat    <  1:703423‑M1/141‑139 (MQ=255)

                                                                                                                                            ttAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGATGCTGCGGTATACGTTTCGTTACCACTCGTCCAAGCAATTGCTAATGTAACCTTTTATTTTTCGTTCTAATCTGCAATTACTAt  >  2:362597/1‑141 (MQ=255)

                                                                                                                                            tggattcctattttaatccttggttgactctttattttatttaaattgtagaacctagaaaataaagtttaattaaaagcaccaatcatttctactttgaaatctaaggtttctaaaatagcaatgactttctttatatcg  >  2:1304698‑M1/1‑1 (MQ=255)

TTCTGCAATTACAACCGATATAAAGAAAGTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATTGGTGCTTTTAATTAAACTTTATTTTCTAGGTTCTACAATTTAAATAAAATAAAGAGTCAACCAAGGATTAAAATAGGAATCCATCCTTGGTTGACTTTCTTTTGTTTGTATTGTTTTTACACGATGCTGCGGTATACGTTTCGTTACCACTCGTCCAAGCAATTGCTAATGTAACCTTTTATTTTTCGTTCTAATCTGCAATTACTAT  >  CP000730/2062832‑2063112

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.