Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 2,744,205 A→G 5.7% intergenic (+142/+51) fdaB → / ← mqo2 fructose‑bisphosphate aldolase/malate dehydrogenase (acceptor)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0007302,744,2050AG 5.7% 490.9 / 14.3 159intergenic (+142/+51)fdaB/mqo2fructose‑bisphosphate aldolase/malate dehydrogenase (acceptor)
Reads supporting (aligned to +/- strand):  ref base A (74/76);  new base G (5/4);  total (79/80)
Fisher's exact test for biased strand distribution p-value = 7.46e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.39e-01

Only 100 of 165 total aligned reads displayed.

TATACATTAAACTATTTTTTGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTCTTCAATTAATGATTCA  >  CP000730/2744066‑2744343
                                                                                                                                            |                                                                                                                                           
tataCATTAAACTATTTTTTGATATAAACTACTAAAAAGGAGTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGaaa                                                                                                                                            <  1:593310/141‑1 (MQ=255)
tataCATTAAACTATTTTTTGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGaaa                                                                                                                                            <  2:1130464/141‑1 (MQ=255)
  taCATTAAACTATTTTTTTTTTTTTTTTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTTCAGTTGATTTTGCCTTATGTATTAGATTACGTAAAAAAATCGTACAGCTGaaaaa                                                                                                                                          >  2:866712/1‑141 (MQ=255)
  taCATTAAACTATTTTTTGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGaaaaa                                                                                                                                          <  1:1016760/141‑1 (MQ=255)
   aCATTAAACTATTTTTTGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAAt                                                                                                                                         <  2:1623824/141‑1 (MQ=255)
      ataaattagtttttGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCtt                                                                                                                                      >  2:1351345/10‑141 (MQ=255)
       tAAACTATTTTTTGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCttt                                                                                                                                     <  1:125706/141‑1 (MQ=255)
       tAAACTATTTTTTGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCttt                                                                                                                                     <  2:616176/141‑1 (MQ=255)
         accTATTTTTGGATATAAACTACTAAAAGGGACTCATACATGTGTTTTAAAGGTATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAACTCGGACAGCTGAAAAATCTTaaa                                                                                                                                   <  2:816657/139‑1 (MQ=255)
          aCTATTTTTTGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAACTGAGAAATCTTAAAg                                                                                                                                  <  1:1208673/141‑1 (MQ=255)
              ttttttGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGAttt                                                                                                                              >  1:1442138/1‑141 (MQ=255)
               tttttGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTtc                                                                                                                            >  1:592621/1‑141 (MQ=255)
               tttttGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTtc                                                                                                                            <  1:568428/141‑1 (MQ=255)
               tttttGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTtc                                                                                                                            <  2:1311519/141‑1 (MQ=255)
                ttttGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTtct                                                                                                                           <  1:1177706/141‑1 (MQ=255)
                ttttGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGAAAACATAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTtct                                                                                                                           <  2:1602302/141‑1 (MQ=255)
                    gATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGt                                                                                                                       <  2:1110642/141‑1 (MQ=255)
                     atatAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTTTTTTTTTTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGtt                                                                                                                      >  2:1152038/1‑141 (MQ=255)
                     atatAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGtt                                                                                                                      >  1:1186062/1‑141 (MQ=255)
                      tataAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTg                                                                                                                     <  2:519694/141‑1 (MQ=255)
                        taAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTc                                                                                                                   <  2:748733/141‑1 (MQ=255)
                         taaCTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAACTGAGAAATCTTAAAGATTTTTCAGCTGTcc                                                                                                                  <  1:1648845/140‑1 (MQ=38)
                         aaaCTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTcc                                                                                                                  <  1:109868/141‑1 (MQ=255)
                         aaaCTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTcc                                                                                                                  <  1:1510063/141‑1 (MQ=255)
                         aaaCTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTcc                                                                                                                  <  1:673473/141‑1 (MQ=255)
                          aaCTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCg                                                                                                                 >  2:1044268/1‑141 (MQ=255)
                           actactAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGa                                                                                                                >  1:69282/1‑141 (MQ=255)
                             tactaAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAAATCTTTAAGATTTCTCAGTTGTCCGAt                                                                                                               >  2:982945/1‑141 (MQ=255)
                             tactaAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGAtt                                                                                                              <  2:1253759/141‑1 (MQ=255)
                             tactaAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGAtt                                                                                                              <  1:1425576/141‑1 (MQ=255)
                             tactaAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGAtt                                                                                                              <  2:835809/141‑1 (MQ=255)
                              actaAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGAttt                                                                                                             <  2:1496721/141‑1 (MQ=255)
                              actaAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGAttt                                                                                                             <  2:1216180/141‑1 (MQ=255)
                                taAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTaa                                                                                                                                   <  2:332295/118‑1 (MQ=255)
                                taAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTaa                                                                                                                                   >  1:332295/1‑118 (MQ=255)
                                  aaaaGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTCGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTGAAGATTTCTCAGTTGTCCGATTTTaaa                                                                                                         >  2:730067/1‑141 (MQ=255)
                                   aaaGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAat                                                                                                        >  2:10308/1‑141 (MQ=255)
                                        aCTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTTTTTTTTTTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGc                                                                                                   >  2:584765/1‑141 (MQ=255)
                                        aCTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGc                                                                                                   <  1:1015641/141‑1 (MQ=255)
                                         cTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCt                                                                                                  >  1:1505285/1‑141 (MQ=255)
                                         cTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCt                                                                                                  >  2:486974/1‑141 (MQ=255)
                                         cTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCt                                                                                                  >  1:750640/1‑141 (MQ=255)
                                           aatatatGTGCTTTAAATGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGAAAAAGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTAt                                                                                                <  2:813372/140‑1 (MQ=255)
                                               cATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGa                                                                                            <  1:625928/141‑1 (MQ=255)
                                                 tgtgCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAAt                                                                                          >  2:1650539/1‑141 (MQ=255)
                                                         aaaGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGtttt                                                                                  >  2:214151/1‑141 (MQ=255)
                                                         aaaGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATATTAAAGCTTTCCTCATTATCTGCATTTTATTTTTTCTATTAGAAATTAGtttt                                                                                  >  1:1562504/1‑141 (MQ=255)
                                                            ggCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAACATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCgt                                                                               >  1:323185/1‑141 (MQ=255)
                                                            ggCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCgt                                                                               >  1:1041783/1‑141 (MQ=255)
                                                              cATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAg                                                                                                                        <  1:782687/98‑1 (MQ=255)
                                                              cATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCgtag                                                                             >  1:754867/1‑141 (MQ=255)
                                                               aTTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGGTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCgtagt                                                                            >  1:1306073/1‑141 (MQ=255)
                                                                ttGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAAttaggttactacgaaa                                                                           <  1:139090/141‑15 (MQ=255)
                                                                ttGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCgtagta                                                                           >  1:1134581/1‑141 (MQ=255)
                                                                   tgtATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAAcc                                                                        <  2:546931/141‑1 (MQ=255)
                                                                     tATGAGTCTTTTTTTATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTa                                                                      >  1:1347143/1‑141 (MQ=255)
                                                                      aTGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTaa                                                                     >  1:995964/1‑141 (MQ=255)
                                                                          gTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCt                                                                 >  1:1261098/1‑141 (MQ=255)
                                                                          gTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCt                                                                 >  2:192216/1‑141 (MQ=255)
                                                                             ttttttGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAg                                                              <  2:146319/141‑1 (MQ=255)
                                                                                ttttttttttgTTGATTTTGACGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTACGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCt                                                           >  2:1120566/11‑141 (MQ=255)
                                                                                 ttGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCtt                                                          >  1:176471/1‑141 (MQ=255)
                                                                                 ttGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCtt                                                          >  2:1543274/1‑141 (MQ=255)
                                                                                  tGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCttt                                                         >  1:242663/1‑141 (MQ=255)
                                                                                   gATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCtttt                                                        <  1:1584375/141‑1 (MQ=255)
                                                                                   gATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCtttt                                                        <  1:1109747/141‑1 (MQ=255)
                                                                                     ttAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTgt                                                      >  2:1359450/1‑140 (MQ=255)
                                                                                     taaaaGTTGATGTTGCCGTATGTATTAGATTACGTAAAAAAATCGAACAGCTTAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGa                                                      <  2:1035861/139‑1 (MQ=255)
                                                                                         aGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAgtt                                                  >  1:713739/1‑141 (MQ=255)
                                                                                          gTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAgttt                                                 <  2:249640/141‑1 (MQ=255)
                                                                                                 ttGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACg                                          <  1:1110392/141‑1 (MQ=255)
                                                                                                 ttGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACg                                          <  2:1465051/141‑1 (MQ=255)
                                                                                                  tGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACgg                                         <  2:1378565/141‑1 (MQ=255)
                                                                                                             ttAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCAt                              <  1:1071912/141‑1 (MQ=255)
                                                                                                             ttAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCAt                              <  2:25117/141‑1 (MQ=255)
                                                                                                                gATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTaa                           >  1:669750/1‑141 (MQ=255)
                                                                                                                gATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTaa                           >  2:1657688/1‑141 (MQ=255)
                                                                                                                 aTTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAAt                          <  1:459276/141‑1 (MQ=255)
                                                                                                                   tACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAAttt                        >  2:69516/1‑141 (MQ=255)
                                                                                                                   tACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAAttt                        <  2:1168808/141‑1 (MQ=255)
                                                                                                                    aCGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAAtttt                       >  2:1442637/1‑141 (MQ=255)
                                                                                                                     cGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAAttttt                      <  2:935466/141‑1 (MQ=255)
                                                                                                                      gTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTAt                                                                                                >  1:128940/1‑66 (MQ=255)
                                                                                                                      gTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTc                     >  2:1506564/1‑141 (MQ=255)
                                                                                                                      gTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTc                     >  1:934678/1‑141 (MQ=255)
                                                                                                                         aaaaaaTCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTCGTTTTCGTAGTAACCTAATTTTAAGTATTTTGGAGTTTGTTTATGGATTTTTTTCATTAATTTTTTGTc                  >  1:322834/1‑141 (MQ=255)
                                                                                                                         aaaaaaTCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTc                  >  1:99285/1‑141 (MQ=255)
                                                                                                                         aaaaaaTCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTc                  >  1:346889/1‑141 (MQ=255)
                                                                                                                          aaaaaTCTGACAGCTGAAAAATCTTTAAGATTTCACAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTCt                 <  1:97366/141‑1 (MQ=255)
                                                                                                                          aaaaaTCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGACTTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTcc                 <  1:1570284/141‑2 (MQ=255)
                                                                                                                          aaaaaTCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTCt                 <  1:341153/141‑1 (MQ=255)
                                                                                                                            aaaTCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTCTTc               >  1:463082/1‑141 (MQ=255)
                                                                                                                            aaaTCGGACAACTGAGAAATCTTAAAGATTTTTCAGCTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTCTTc               >  1:418798/1‑141 (MQ=37)
                                                                                                                               tCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTCTTCAAt            >  2:1250812/1‑141 (MQ=255)
                                                                                                                                cGGACAACTGAGAAATCTTAAAGATTTTTCAGCTGTCCGATATTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTACTTCTGAGTCTTTTGAAGTTTATTTACGGATTTTTCTCATTAATTTTTCGTCTTCAAtt           >  2:56772/1‑141 (MQ=37)
                                                                                                                                 ggACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTCTTCAATTa          >  2:1403353/1‑141 (MQ=255)
                                                                                                                                     aacTGAGAAATCTTAAAGATTTTTCAGCTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTCTTCAATTAATGa      >  1:1381579/3‑141 (MQ=38)
                                                                                                                                      gCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTCTTGAATTCATGAt     >  2:1396080/1‑141 (MQ=255)
                                                                                                                                      gCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTCTTCAATTAATGAt     >  1:725328/1‑141 (MQ=255)
                                                                                                                                         gAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTCTTCAATTAATGATTCa  <  1:863805/141‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                           
TATACATTAAACTATTTTTTGATATAAACTACTAAAAAGGACTCATACATGTGCTTTAAAGGCATTGTGTATGAGTCTTTTTTGATTAAAGTTGATTTTGCCGTATGTATTAGATTACGTAAAAAAATCGGACAGCTGAAAAATCTTTAAGATTTCTCAGTTGTCCGATTTTAAATATAGCTATTAGAATTTAGTTTTCGTAGTAACCTAATTCTAAGTCTTTTGAAGTTTGTTTACGGATTTTTCTCATTAATTTTTCGTCTTCAATTAATGATTCA  >  CP000730/2744066‑2744343

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: