New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	531230 =	49 (0.890)	4 (0.080)	4/242	NT	8.5%	intergenic (+801/‑4924)	veg/rplY	hypothetical protein/ribosomal protein L25
	?	CP000730	531269 =	39 (0.740)					intergenic (+840/‑4885)	veg/rplY	hypothetical protein/ribosomal protein L25

AACTTAAATATATCTGGTGATGATATGCCTAAGTTTGGTTTAGCAAGAATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/531283‑531230 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcaccAGATATATTTAAGTTGATTAATTTAGATAAGCGTTACGACGTACATACGAAAATGTGTTATGAGGCCTTAGAAAATCGAGATTATCAACAATTATGTCAAAGTTTGTCTAATCGATTAGAGCCAATTTCTGTTTCAAAA  >  CP000730/531269‑531407                                                                                                                                                                                                   AACTTAAATATATCTGGTGATGATATGCCTAAGTTTGGTTTAGCAAGAATCACCAGATATATTTAAGTT                                                                                                                              >  1:537011/1‑69 AACTTAAATATATCTGGTGATGATATGCCTAAGTTTGGTTTAGCAAGAATCACCAGATATATTTAAGTT                                                                                                                              <  2:537011/69‑1           TATCTGGTGATGATATGCCTAAGTTTGGTTTAGCAAGAATCACCAGATATATTTAAGTTGATTAATTTAGATAAGCGTTACGACGTACATACGAAAATGTGTTATGAGGCCTTAGAAAATCGAGATTATCAACAATTATGT                                            >  2:7049/1‑141                    ATGATATGCCTAAGTTTGGTTTAGCAAGAATCACCAGATATATTTAAGTTGATTAATTTAGATAAGCGTTACGACGTACATACGAAAATGTGTTATGAGGCCTTAGAAAATCGAGATTATCAACAATTATGTCAAAGTTTG                                   >  1:28811/1‑141                                                  TCACCAGATATATTTAAGTTGATTAATTTAGATAAGCGTTACGACGTACATACGAAAATGTGTTATGAGGCCTTAGAAAATCGAGATTATCAACAATTATGTCAAAGTTTGTCTAATCGATTAGAGCCAATTTCTGTTTCA     <  2:460452/141‑1                                                     CCAGATATATTTAAGTTGATTAATTTAGATAAGCGTTACGACGTACATACGAAAATGTGTTATGAGGCCTTAGAAAATCGAGATTATCAACAATTATGTCAAAGTTTGTCTAATCGATTAGAGCCAATTTCTGTTTCAAAA  >  2:402609/1‑141                                                                                                                                                                                                   AACTTAAATATATCTGGTGATGATATGCCTAAGTTTGGTTTAGCAAGAATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/531283‑531230 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcaccAGATATATTTAAGTTGATTAATTTAGATAAGCGTTACGACGTACATACGAAAATGTGTTATGAGGCCTTAGAAAATCGAGATTATCAACAATTATGTCAAAGTTTGTCTAATCGATTAGAGCCAATTTCTGTTTCAAAA  >  CP000730/531269‑531407

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.